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Annotation type
1
eQTL
1
hQTL
1
sQTL
Annotation Category
3
Genetic variant effects
Annotation type Category
2
RNA-seq
1
ChIP-seq
Available data
bed bed3+
16
bigWig
tsv
File set status
3
released
Genome assembly (visualization)
2
hg19
Organism
3
Homo sapiens
Biosample type
3
primary cell
Biosample term
21
heart
19
stomach
18
A549
18
brain
16
kidney
16
lung
16
muscle of arm
15
muscle of leg
15
small intestine
14
adrenal gland
14
islet of Langerhans
14
liver
14
placenta
13
common myeloid progenitor, CD34-positive
13
large intestine
13
left lung
13
muscle of back
11
right kidney
11
right lung
11
thymus
10
hematopoietic multipotent progenitor cell
9
CD4-positive, alpha-beta memory T cell
9
left kidney
9
renal cortex interstitium
9
renal pelvis
B cell
8
adipose tissue
8
heart left ventricle
7
CD8-positive, alpha-beta memory T cell
7
induced pluripotent stem cell
7
mature neutrophil
7
spinal cord
6
K562
6
embryonic stem cell
6
hepatocyte
6
mononuclear cell
6
spleen
5
CD14-positive, CD16-negative classical monocyte
5
MCF-7
5
endothelial cell of umbilical vein
5
heart right ventricle
5
neural progenitor cell
5
neutrophil
5
sigmoid colon
5
skeletal muscle tissue
5
trophoblast cell
4
CD14-positive monocyte
4
T cell
4
alternatively activated macrophage
4
angular gyrus
4
aorta
4
body of pancreas
4
caudate nucleus
4
chorionic villus
4
endocrine pancreas
4
foreskin keratinocyte
4
gastrocnemius medialis
4
mesenchymal stem cell
4
muscle of trunk
4
ovary
4
psoas muscle
4
skeletal muscle myoblast
4
skeletal muscle satellite cell
4
temporal lobe
4
thyroid gland
4
tibial nerve
4
transverse colon
3
CD4-positive, alpha-beta T cell
3
HeLa-S3
3
Peyer's patch
3
T-helper 1 cell
3
T-helper 17 cell
3
T-helper 2 cell
3
adipocyte
3
ascending aorta
3
cartilage tissue
3
chorion membrane
3
coronary artery
3
endometrium adenocarcinoma
3
fibroblast of cardiac tissue
3
fibroblast of dermis
3
fibroblast of lung
3
glomerular endothelial cell
3
immortal human breast epithelial cell line cell
3
inflammatory macrophage
3
kidney glomerular epithelial cell
3
kidney tubule cell
3
layer of hippocampus
3
left renal cortex interstitium
3
mammary gland epithelial cell
3
monocyte
3
naive T cell
3
naive thymus-derived CD4-positive, alpha-beta T cell
3
natural killer cell
3
neurosphere
3
omental fat pad
3
regulatory T cell
3
retina
3
right cardiac atrium
3
right renal cortex interstitium
3
subcutaneous adipose tissue
3
testis
3
thoracic aorta
3
tibial artery
3
upper lobe of left lung
2
22Rv1
2
Brodmann (1909) area 46
2
EndoC_BH1
2
KARPAS-422 cell
2
LNCaP clone FGC
2
NAMALWA cell
2
SK-N-DZ
2
SK-N-SH
2
T47D
2
adipose-derived stem cell
2
blood
2
breast epithelium
2
bronchial epithelial cell
2
cerebellum
2
cingulate gyrus
2
colonic mucosa
2
dermis blood vessel endothelial cell
2
dermis lymphatic vessel endothelial cell
2
differentiating adipose-derived stem cell
2
duodenal mucosa
2
endodermal cell
2
epithelial cell of prostate
2
epithelial cell of proximal tubule
2
erythroblast
2
esophagus
2
esophagus muscularis mucosa
2
esophagus squamous epithelium
2
eye
2
fibroblast of breast
2
foreskin fibroblast
2
frontal cortex
2
germinal matrix
2
globus pallidus
2
glomerular visceral epithelial cell
2
hepatic stellate cell
2
keratinocyte
2
kidney capillary endothelial cell
2
kidney epithelial cell
2
left renal pelvis
2
limb
2
lower leg skin
2
medulla oblongata
2
midbrain
2
middle frontal gyrus
2
mucosa of rectum
2
muscle cell
2
muscle layer of colon
2
muscle layer of duodenum
2
myoepithelial cell of mammary gland
2
neural cell
2
pancreas
2
pancreatic acinar cell
2
pancreatic ductal cell
2
parathyroid adenoma
2
pons
2
prostate gland
2
putamen
2
renal cortical epithelial cell
2
right atrium auricular region
2
right renal pelvis
2
skeletal muscle fiber
2
skin fibroblast
2
smooth muscle cell
2
stomach smooth muscle
2
substantia nigra
2
superior temporal gyrus
2
tongue
2
trophoblast
2
urinary bladder
2
vagina
1
8988T
1
A172
1
A673
1
ACC112
1
ACHN
1
AG04449 cell
1
AG04450 cell
1
AG08395 cell
1
AG08396 cell
1
AG09309 cell
1
AG09319 cell
1
AG10803 cell
1
AG20443
1
Ammon's horn
1
BE(2)-C
1
BJ cell
1
BL-2 cell
1
C4-2B
1
CD1c-positive myeloid dendritic cell
1
CD34-negative, CD41-positive, CD42-positive megakaryocyte cell
1
CD8-positive, alpha-beta T cell
1
CMK
1
COLO829
1
CWRU1
1
Caco-2 cell
Life stage
3
adult
Date released
January, 2022
3
May, 2021
Software used
3
limix
1
macs
1
sqtlseeker
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
biosample_term_name!
B cell
files.file_type!
bed bed3+
tsv
month_released!
January, 2022
Showing 3 of 3 results
table-tab-icon
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Download
FileSet
DSR337BHM
released
Annotation file set
: PSI splicing quantitative trait loci (sQTLs) from RNA-seq of BLUEPRINT epigenome project of human immune cell types (CD14+ monocytes) from up to 197 individuals.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR930EID
released
Annotation file set
: histone quantitative trait loci (hQTL) from H3K27ac ChIP-seq of BLUEPRINT epigenome project of human immune cell types (CD14+ monocytes) from up to 197 individuals.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR693IVW
released
Annotation file set
: expression quantitative trait loci (eQTLs) from RNA-seq of BLUEPRINT epigenome project of human immune cell types (CD14+ monocytes) from up to 197 individuals.
Lab:
AMP-T2D consortium
Project:
AMP