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Schema
Citing CMDGA
Clear Filters
Annotation type
1
binding sites
1
candidate regulatory elements
Annotation Category
2
cis-regulatory elements
Annotation type Category
2
ChIP-seq
1
DNase-seq
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
2
primary cell
Biosample term
128
monocyte
43
CD8-positive, alpha-beta T cell
19
epithelial cell of proximal tubule
17
glomerular endothelial cell
17
regulatory T cell
16
hepatocyte
14
T-helper 1 cell
14
common myeloid progenitor, CD34-positive
13
CD4-positive, alpha-beta T cell
13
osteoblast
12
endothelial cell of umbilical vein
12
foreskin fibroblast
12
naive thymus-derived CD4-positive, alpha-beta T cell
11
B cell
11
T-helper 17 cell
11
mammary epithelial cell
10
endothelial cell
10
macrophage
9
mature neutrophil
9
neutrophil
skeletal muscle myoblast
8
T-helper 2 cell
7
foreskin keratinocyte
7
glomerular visceral epithelial cell
7
kidney loop of Henle thin ascending limb epithelial cell
7
naive thymus-derived CD8-positive, alpha-beta T cell
7
natural killer cell
7
pancreatic ductal cell
6
bronchial epithelial cell
6
gamma-delta T cell
6
kidney interstitial cell
6
olfactory receptor cell
6
peripheral blood mononuclear cell
6
retinal pigment epithelial cell
5
cardiac fibroblast
5
CD14-positive, CD16-negative classical monocyte
5
CD4-positive, alpha-beta memory T cell
5
T follicular helper cell
5
alternatively activated macrophage
5
cardiac muscle cell
5
central memory CD8-positive, alpha-beta T cell
5
effector memory CD8-positive, alpha-beta T cell
5
erythroblast
5
fibroblast of lung
5
fibroblast of mammary gland
5
fibroblast of pulmonary artery
5
fibroblast of villous mesenchyme
5
hepatic stellate cell
5
kidney cortex collecting duct principal cell
5
kidney glomerular epithelial cell
5
kidney loop of Henle thick ascending limb epithelial cell
5
memory B cell
5
mesangial cell
5
renal cortical epithelial cell
5
tracheal epithelial cell
5
trophoblast cell
4
CD14-positive monocyte
4
CD1c-positive myeloid dendritic cell
4
T-cell
4
acute myeloid leukemia cell
4
adult endothelial progenitor cell
4
aortic adventitial fibroblast
4
astrocyte
4
cardiac fibroblast
4
choroid plexus epithelial cell
4
dermis blood vessel endothelial cell
4
effector CD4-positive, alpha-beta T cell
4
effector T cell
4
glutamatergic neuron
4
inflammatory macrophage
4
keratinocyte
4
kidney epithelial cell
4
kidney tubule cell
4
mature natural killer cell
4
memory T cell
4
memory regulatory T cell
4
naive B cell
4
nephron progenitor
4
neurosphere
4
pancreatic beta cell
4
plasma cell
4
preadipocyte
4
pulmonary artery endothelial cell
4
renal epithelial cell
4
skeletal muscle satellite cell
3
Ishikawa
3
S-shaped body
3
Th1 cell
3
Th17 cell
3
astrocyte of the cerebellum
3
astrocyte of the hippocampus
3
blood cell
3
bone marrow cell
3
brain pericyte
3
erythroid cell
3
fibroblast
3
foreskin melanocyte
3
kidney cell
3
kidney collecting duct intercalated cell
3
kidney connecting tubule epithelial cell
3
kidney cortex collecting duct intercalated cell
3
kidney distal convoluted tubule epithelial cell
3
kidney inner medulla collecting duct principal cell
3
kidney loop of Henle descending limb epithelial cell
3
kidney resident macrophage
3
mast cell
3
mesenchymal stem cell
3
meso-epithelial cell
3
mononuclear cell of bone marrow
3
myotube
3
naive B cel
3
naive regulatory T cell
3
neoplastic cell
3
pancreatic acinar cell
3
pancreatic alpha cell
3
peripheral blood stem cell
3
pre-B acute lymphoblastic leukemia cell
3
pulmonary interstitial fibroblast
3
skeletal muscle cell
3
smooth muscle cell of the brain vasculature
2
Adipose stromal cell
2
B-lymphocyte
2
CD34-positive, CD38-negative hematopoietic stem cell
2
CD4-positive, CD25-positive, alpha-beta regulatory T cell
2
Kupffer cell
2
Rhabdoid Tumor of the Kidney
2
T cell
2
Th2 cell
2
activated CD4-positive, alpha-beta T cell
2
brain microvascular endothelial cell
2
cardiac muscle myoblast
2
chronic lymphocytic leukemia cell
2
columnar chondrocyte
2
dermis microvascular lymphatic vessel endothelial cell
2
effector memory CD4-positive, alpha-beta T cell
2
endothelial cell of coronary artery
2
epithelial cell of prostate
2
erythroid progenitor cell
2
fibroblast of breast
2
fibroblast of dermis
2
fibroblast of peridontal ligament
2
fibroblast of the aortic adventitia
2
head and neck squamous cell carcinoma
2
iris pigment epithelial cell
2
kidney capillary endothelial cell
2
kidney inner medulla collecting duct intercalated cell
2
leukemic stem cell
2
leukocyte
2
lung microvascular endothelial cell
2
mantle cell lymphoma cell
2
mononuclear cell
2
myeloid dendritic cell
2
myoepithelial cell of mammary gland
2
neuronal stem cell
2
non-pigmented ciliary epithelial cell
2
pancreatic delta cell
2
pancreatic polypeptide-secreting cell
2
peripheral blood-derived erythroblast
2
primordial germ cell
2
prostate gland cancer cell
2
renal proximal tubule cell
2
renal vesicle
2
small cell ovarian carcinoma cell
2
smooth muscle cell of the coronary artery
2
somatic muscle myotube
2
vascular associated smooth muscle cell
1
brain microvascular endothelial cell
1
retinal pigment epithelial cell
1
B-1a B cell
1
B-Lymphocytes
1
B-cell lymphoma cell
1
CD34-negative, CD41-positive, CD42-positive megakaryocyte cell
1
CD34-positive, CD38-positive common myeloid progenitor OR CD34-positive, CD38-positive common lymphoid progenitor
1
CD4-Positive T-Lymphocytes
1
CD8-positive, alpha-beta memory T cell
1
Glioblastoma
1
Heart fetal (cardiac muscle cell)
1
Leydig cell
1
Liver fetal (hepatocyte)
1
Schwann cell
1
Stromal Predominant Kidney Wilms Tumor
1
T-cell lymphoma cell
1
activated CD8-positive, alpha-beta T cell
1
activated pancreatic stellate cell
1
acute myeloid leukemia
1
alpha-beta T cell
1
alveolar cell type II
1
amniotic epithelial cell
1
aortic endothelial cell
1
aortic smooth muscle cell
1
astrocyte of the spinal cord
1
bone cell
1
cardiac atrium fibroblast
1
cardiac ventricle fibroblast
1
cells - cultured fibroblasts
1
central memory CD4-positive, alpha-beta T cell
1
cholangiocyte
1
colorectal cancer
1
cytotoxic T cell
1
dedifferentiated amniotic fluid mesenchymal stem cell
Life stage
1
unknown
Date released
September, 2022
2
February, 2021
Software used
1
encode-ccres
1
macs
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
biosample_term_name!
skeletal muscle myoblast
month_released!
September, 2022
Showing 2 of 2 results
table-tab-icon
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Download
FileSet
DSR960SRS
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE mononuclear cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR323OLK
released
Annotation file set
: Binding sites annotation for Blood Cord_blood_mononuclear from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP