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Annotation type
2
candidate regulatory elements
1
chromatin state
1
target gene predictions
Annotation Category
3
cis-regulatory elements
1
Target gene links
Annotation type Category
4
ChIP-seq
3
DNase-seq
Available data
3
bed bed3+
1
bed bed9
File set status
4
released
Genome assembly (visualization)
4
hg19
1
GRCh38
Organism
4
Homo sapiens
Biosample type
4
tissue
Biosample term
86
stomach
9
stomach smooth muscle
7
gastroesophageal sphincter
4
mucosa of stomach
3
parietal cell
3
peptic cell
2
foveolar cell of stomach
2
stomach neuroendocrine cell
1
esophagus - gastroesophageal junction
1
gastric (mucosa of stomach)
1
gastric goblet cell
Organ
4
stomach
Life stage
4
adult
Date released
3
September, 2022
1
February, 2021
Software used
2
r
1
chromhmm
1
encode-ccres
Lab
4
AMP-T2D consortium
Project
4
AMP
Collection Tags
3
EpiMap
1
ENCODE
RFA
4
AMP
Showing 4 of 4 results
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Download
FileSet
DSR858ZRU
released
Annotation file set
: Candidate regulatory elements for BSS01284 mucosa of stomach from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR472KMW
released
Annotation file set
: Target gene predictions for BSS01284 mucosa of stomach from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR103IST
released
Annotation file set
: Chromatin states for BSS01284 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR896VPB
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE mucosa of stomach
Lab:
AMP-T2D consortium
Project:
AMP