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Clear Filters
Annotation type
  • 4candidate regulatory elements
  • 2chromatin state
  • 2target gene predictions
Annotation Category
  • 6cis-regulatory elements
  • 2Target gene links
Annotation type Category
  • 8ChIP-seq
  • 6DNase-seq
Available data
  • 6bed bed3+
  • 2bed bed9
File set status
  • 8released
Genome assembly (visualization)
  • 8hg19
  • 2GRCh38
Organism
  • 8Homo sapiens
Biosample type
  • 8primary cell
Biosample term
  • 26MCF-7
  • 16mammary gland epithelial cell
  • 10mammary epithelial cell
  • 8fibroblast of mammary gland
  • 8myoepithelial cell of mammary gland
  • 7T47D
  • 7luminal epithelial cell of mammary gland
  • 3MCF 10A
  • 2mammary gland
Organ
  • 8epithelium
  • 8mammary gland
Life stage
  • 8adult
Date released
  • 6September, 2022
  • 2February, 2021
Software used
  • 4r
  • 2chromhmm
  • 2encode-ccres
Lab
  • 8AMP-T2D consortium
Project
  • 8AMP
Collection Tags
  • 6EpiMap
  • 2ENCODE
RFA
  • 8AMP

Showing 8 of 8 results

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  • FileSet

    DSR632LWC

    released

    Annotation file set: Candidate regulatory elements for BSS01341 myoepithelial cell of mammary gland from EpiMap
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR053YCC

    released

    Annotation file set: Candidate regulatory elements for BSS01340 myoepithelial cell of mammary gland from EpiMap
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR201VSW

    released

    Annotation file set: Target gene predictions for BSS01341 myoepithelial cell of mammary gland from EpiMap
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR160KCD

    released

    Annotation file set: Target gene predictions for BSS01340 myoepithelial cell of mammary gland from EpiMap
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR157NDF

    released

    Annotation file set: Chromatin states for BSS01341 using the 18-state Roadmap model from EpiMap
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR291DVC

    released

    Annotation file set: Chromatin states for BSS01340 using the 18-state Roadmap model from EpiMap
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR078RYI

    released

    Annotation file set: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE myoepithelial cell of mammary gland
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR662IQV

    released

    Annotation file set: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE myoepithelial cell of mammary gland
    Lab: AMP-T2D consortium
    Project: AMP
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