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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
1
candidate regulatory elements
1
chromatin state
1
target gene predictions
Annotation Category
2
cis-regulatory elements
1
Target gene links
Annotation type Category
3
ChIP-seq
2
DNase-seq
Available data
2
bed bed3+
1
bed bed9
File set status
3
released
Genome assembly (visualization)
3
hg19
1
GRCh38
Organism
3
Homo sapiens
Biosample type
3
primary cell
Biosample term
82
heart
72
brain
69
kidney
66
muscle of arm
64
stomach
62
lung
60
placenta
58
muscle of leg
56
large intestine
55
small intestine
54
H1-hESC
54
muscle of back
53
HeLa-S3
52
left lung
51
neural progenitor cell
47
thymus
45
right lung
40
right kidney
39
renal cortex interstitium
39
renal pelvis
37
adrenal gland
36
left kidney
35
spinal cord
32
endothelial cell
30
fibroblast
29
CD8-positive, alpha-beta T cell
28
islet of Langerhans
28
macrophage
26
monocyte
24
smooth muscle cell
23
CD4-positive, alpha-beta memory T cell
23
liver
23
pancreatic ductal cell
23
trophoblast cell
22
EndoC_BH1
22
K562
22
adipocyte
22
foreskin keratinocyte
22
pericyte cell
21
keratinocyte
20
breast cancer cell
19
CD14-positive monocyte
19
HFFc6
19
foreskin fibroblast
18
B cell
18
embryonic stem cell
18
heart left ventricle
18
hepatocyte
17
astrocyte
17
endothelial cell of umbilical vein
17
muscle of trunk
16
H9
16
HepG2
16
cardiac muscle cell
16
chorionic villus
16
induced pluripotent stem cell
16
retinal pigment epithelial cell
15
T-helper 17 cell
15
osteoblast
15
retina
14
mesenchymal stem cell
14
pancreatic acinar cell
13
T cell
13
bronchial epithelial cell
13
excitatory neuron
13
fibroblast of cardiac tissue
13
heart right ventricle
13
neurosphere
13
pancreatic beta cell
13
regulatory T cell
13
spleen
12
common myeloid progenitor, CD34-positive
12
lymphoblastoid cell line
12
neuroblastoma cell
12
pancreatic delta cell
11
GM12878
11
epithelial cell of prostate
11
fibroblast of lung
10
22Rv1
10
Rhabdomyosarcoma
10
gastric cancer cell
10
left cardiac atrium
10
lymphocyte
10
neuronal stem cell
10
progenitor cell of endocrine pancreas
10
right renal pelvis
10
skin fibroblast
10
trophoblast
9
HEK293
9
IMR-90
9
SK-N-DZ
9
SK-N-SH
9
cardiomyocytes
9
choroid plexus epithelial cell
9
diffuse intrinsic pontine glioma
9
erythroblast
9
left renal cortex interstitium
9
left renal pelvis
9
liposarcoma
9
mammary epithelial cell
9
mammary gland epithelial cell
9
pancreatic alpha cell
9
right renal cortex interstitium
9
skeletal muscle myoblast
9
tongue
8
B-lymphoblastoid cell line
8
GM06990
8
GM12864
8
GM12865
8
NAMALWA cell
8
T-helper 2 cell
8
colon epithelial cell
8
endodermal cell
8
fibroblast cell line
8
fibroblast of dermis
8
limb
8
mesendoderm
8
neutrophil
8
ovary
8
pancreatic stellate cell
8
pituitary stalk
8
skeletal muscle fiber
8
testis
7
AG04449 cell
7
AG04450 cell
7
BE(2)-C
7
BJ cell
7
CD1c-positive myeloid dendritic cell
7
CD4-positive helper T cell
7
CD8-positive, alpha-beta memory T cell
7
CMK
7
Jurkat
7
MCF-7
7
MG63
7
SK-N-MC
7
T-helper 1 cell
7
WERI-Rb-1
7
chorion membrane
7
dermis lymphatic vessel endothelial cell
7
esophageal adenocarcinoma
7
extended pluripotent stem (EPS) cells
7
eye
7
fibroblast of pulmonary artery
7
foreskin melanocyte
7
hematopoietic multipotent progenitor cell
7
pancreas
7
skeletal muscle satellite cell
7
skeletal muscle tissue
6
Chondroid Chordoma
6
Daoy
6
GM08714
6
GM12891
6
GM12892
6
GM18507
6
H7-hESC
6
HUES6
6
HUES8
6
PC-9
6
WI38
6
adipose tissue
6
chondrocyte
6
fibroblast of mammary gland
6
fibroblast of villous mesenchyme
6
glomerular endothelial cell
6
glomerular visceral epithelial cell
6
hESC cell
6
iPSC derived cell line
6
mesodermal cell
6
natural killer cell
6
neuroblastoma cell line
6
psoas muscle
6
type I muscle cell
5
A549
5
A673
5
CD4-positive, alpha-beta T cell
5
CyT49
5
Ewing sarcoma
5
GM19240
5
HCT-116 cell
5
HK-2 cell
5
HUES64
5
KARPAS-422 cell
5
L1-S8
5
NT2-D1 cell
5
SGBS preadipocytes
5
acute myeloid leukemia
5
cardiac precursors (cardiac muscle cell)
5
enterocyte
5
kidney epithelial cell
5
naive thymus-derived CD4-positive, alpha-beta T cell
5
neural cell
5
non-pigmented ciliary epithelial cell
5
osteosarcoma
5
prostate cancer cell line
5
pulmonary artery endothelial cell
5
sigmoid colon
5
skin of body
5
smooth muscle cell of the coronary artery
5
umbilical cord
4
AG09309 cell
Life stage
adult
3
unknown
Date released
3
September, 2022
Software used
2
r
1
chromhmm
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
disease_term_name!
hypertensive disorder
month_released!
May, 2020
relevant_life_stage!
adult
Showing 3 of 3 results
table-tab-icon
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Download
FileSet
DSR445VLT
released
Annotation file set
: Candidate regulatory elements for BSS01346 naive T cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR680JMY
released
Annotation file set
: Target gene predictions for BSS01346 naive T cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR439SQN
released
Annotation file set
: Chromatin states for BSS01346 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP