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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
1
accessible chromatin
1
binding sites
1
histone modifications
Annotation Category
3
cis-regulatory elements
Annotation type Category
2
ChIP-seq
1
DNase-seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
3
primary cell
0
in vitro differentiated cells
Biosample term
130
monocyte
54
common myeloid progenitor, CD34-positive
51
CD8-positive, alpha-beta T cell
47
B cell
47
neural progenitor cell
43
endothelial cell
43
hematopoietic multipotent progenitor cell
38
hepatocyte
34
fibroblast
32
CD4-positive, alpha-beta memory T cell
31
CD14-positive monocyte
31
macrophage
29
adipocyte
28
regulatory T cell
27
smooth muscle cell
26
natural killer cell
24
pericyte cell
23
T cell
23
T-helper 1 cell
23
epithelial cell of proximal tubule
23
trophoblast cell
22
CD8-positive, alpha-beta memory T cell
22
foreskin keratinocyte
21
T-helper 17 cell
21
glomerular endothelial cell
21
pancreatic ductal cell
20
endothelial cell of umbilical vein
20
mononuclear cell
18
mesenchymal stem cell
17
T-helper 2 cell
17
astrocyte
17
keratinocyte
17
osteoblast
17
skeletal muscle myoblast
16
endothelial cell of hepatic sinusoid
16
fibroblast of lung
16
foreskin fibroblast
16
mammary gland epithelial cell
16
retinal pigment epithelial cell
15
CD4-positive, alpha-beta T cell
15
embryonic stem cell
15
neutrophil
15
pancreatic acinar cell
15
pancreatic beta cell
14
cardiac muscle cell
14
excitatory neuron
14
naive thymus-derived CD4-positive, alpha-beta T cell
14
pancreatic alpha cell
13
mammary epithelial cell
13
neurosphere
13
pancreatic delta cell
13
skeletal muscle satellite cell
12
bronchial epithelial cell
12
fibroblast of cardiac tissue
12
fibroblast of dermis
12
neuronal stem cell
11
cardiomyocytes
11
erythroblast
11
glomerular visceral epithelial cell
10
dermis blood vessel endothelial cell
10
hepatic stellate cell
10
kidney tubule cell
10
skin fibroblast
9
epithelial cell of prostate
9
extended pluripotent stem (EPS) cells
9
foreskin melanocyte
9
induced pluripotent stem cell
9
mast cell
9
mature neutrophil
9
memory B cell
9
naive T cell
9
naive thymus-derived CD8-positive, alpha-beta T cell
9
progenitor cell of endocrine pancreas
9
skeletal muscle fiber
8
T-cell acute lymphoblastic leukemia
8
cardiomyocytes (cardiac muscle cell)
8
dendritic cell
8
endodermal cell
8
fibroblast of breast
8
fibroblast of mammary gland
8
fibroblast of pulmonary artery
8
fibroblast of villous mesenchyme
8
glutamatergic neuron
8
kidney glomerular epithelial cell
8
mesendoderm
8
myoepithelial cell of mammary gland
8
neuroblastoma cell line
8
renal cortical epithelial cell
7
CD1c-positive myeloid dendritic cell
7
CD4-positive helper T cell
7
choroid plexus epithelial cell
7
endothelial cell of lymphatic vessel
7
kidney epithelial cell
7
kidney interstitial cell
7
kidney loop of Henle thin ascending limb epithelial cell
7
luminal epithelial cell of mammary gland
7
mesangial cell
7
mesodermal cell
7
neural cell
7
pancreatic stellate cell
7
pulmonary artery endothelial cell
7
type I muscle cell
7
type II muscle cell
7
type II pneumocyte
6
T-cell
6
alternatively activated macrophage
6
astrocyte of the cerebellum
6
astrocyte of the hippocampus
6
bipolar neuron
6
cardiac precursors (cardiac muscle cell)
6
colon epithelial cell
6
cortical cell of adrenal gland
6
dermis lymphatic vessel endothelial cell
6
enterocyte
6
epithelial cell of esophagus
6
gamma-delta T cell
6
muscle cell
6
myofibroblast cell
6
naive B cell
6
neuron
6
olfactory receptor cell
6
peripheral blood mononuclear cell
6
plasma cell
6
skeletal muscle cell
6
smooth muscle cell of the brain vasculature
5
cardiac fibroblast
5
Adaptive / Maladaptive / Repairing Fibroblast
5
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
5
Afferent / Efferent Arteriole Endothelial Cell
5
B Cell
5
CD14-positive, CD16-negative classical monocyte
5
Classical Dendritic Cell
5
Connecting Tubule Cell
5
Connecting Tubule Intercalated Cell Type A
5
Connecting Tubule Principal Cell
5
Cortical Thick Ascending Limb Cell
5
Cycling Endothelial Cell
5
Cycling Epithelial Cell
5
Cycling T Cell
5
Cytotoxic T Cell
5
Degenerative Connecting Tubule Cell
5
Degenerative Connecting Tubule Cell / Principal Cell
5
Degenerative Cortical Thick Ascending Limb Cell
5
Degenerative Distal Convoluted Tubule Cell
5
Degenerative Intercalated Cell Type A
5
Degenerative Peritubular Capillary Endothelial Cell
5
Degenerative Principal Cell
5
Degenerative Proximal Tubule Epithelial Cell
5
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
5
Degenerative Vascular Smooth Muscle Cell
5
Descending Thin Limb Cell Type 1
5
Distal Convoluted Tubule Cell Type 1
5
Fibroblast
5
Glomerular Capillary Endothelial Cell
5
Intercalated Cell Type A
5
Intercalated Cell Type B
5
Lymphatic Endothelial Cell
5
M2 Macrophage
5
Medullary Thick Ascending Limb Cell
5
Mesangial Cell
5
Monocyte
5
Monocyte-derived Cell
5
Myofibroblast
5
Natural Killer T Cell
5
Natural Killer T Cell Type 1
5
Natural Killer T Cell Type 2
5
Non-Classical Monocyte
5
Parietal Epithelial Cell
5
Peritubular Capillary Endothelial Cell
5
Plasma Cell
5
Plasmacytoid Dendritic Cell
5
Podocyte
5
Principal Cell
5
Proximal Tubule Epithelial Cell Segment 1 and 2
5
Proximal Tubule Epithelial Cell Segment 3
5
Regulatory T Cell
5
Renin-positive Juxtaglomerular Granular Cell
5
SGBS preadipocytes
5
T Cell
5
T follicular helper cell
5
Th1 cell
5
Transitional Principal-Intercalated Cell
5
Vascular Smooth Muscle Cell / Pericyte
5
basal cell
5
brain microvascular endothelial cell
5
cardiac fibroblast
5
central memory CD8-positive, alpha-beta T cell
5
chondrocyte
5
effector memory CD8-positive, alpha-beta T cell
5
endocardial cell
5
fibroblast of peridontal ligament
5
fibroblast of the aortic adventitia
5
gabaergic neuron
5
inflammatory macrophage
5
inhibitory neuron
5
iris pigment epithelial cell
5
kidney capillary endothelial cell
5
kidney cortex collecting duct principal cell
Date released
2
February, 2021
1
June, 2020
Software used
3
macs
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
files.file_type!
bigBed narrowPeak
organ_slims!
ovary
Showing 3 of 3 results
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Download
FileSet
DSR671YEO
released
Annotation file set
: Histone modifications annotation for Others Tumor from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR813SCM
released
Annotation file set
: Binding sites annotation for Others Tumor from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR589UWZ
released
Annotation file set
: Accessible chromatin annotation for Others Tumor from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP