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Annotation type
1
accessible chromatin
1
gene expression
Annotation Category
1
Gene expression levels
1
cis-regulatory elements
Annotation type Category
1
snATAC-seq
1
snRNA-seq
Available data
1
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
2
primary cell
Biosample term
6
adipocyte
4
endothelial cell
4
mesenchymal stem cell
4
skeletal muscle fiber
4
smooth muscle cell
4
type I muscle cell
4
type II muscle cell
2
ESC derived cell line
2
glial cell
2
leukocyte
2
neural cell
2
skeletal muscle satellite cell
1
CD34-PB
1
GM12878
1
H1-hESC
1
HepG2
1
K562
1
caudate nucleus
1
cingulate gyrus
1
colonic mucosa
1
duodenal mucosa
1
endothelial cell of umbilical vein
1
fibroblast of lung
1
islet of Langerhans
1
keratinocyte
1
layer of hippocampus
1
liver
1
mammary epithelial cell
1
mid-frontal lobe
1
mucosa of rectum
1
rectum smooth muscle tissue
1
skeletal muscle
1
skeletal muscle myoblast
1
stomach smooth muscle
1
subcutaneous adipose tissue
1
substantia nigra
1
temporal lobe
Date released
2
February, 2024
Software used
1
deeptools
1
macs
1
r
1
samtools
1
umitools
Lab
5
AMP-T2D consortium
2
Stephen Parker, UMich
Project
2
AMP
Collection Tags
2
T2DKP
2
DGA
RFA
2
AMP2
Showing 2 of 2 results
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FileSet
DSR025YBG
released
Annotation file set
: Cell type chromatin broad peaks and bw of neural cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR811PAV
released
Annotation file set
: Cell type gene expression mean TPM and bw of neural cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP