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Citing CMDGA
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Annotation type
1
gene expression
1
target gene predictions
Annotation Category
1
Gene expression levels
1
Target gene links
Annotation type Category
1
pCHi-C
1
snRNA-seq
Available data
1
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
1
in vitro differentiated cells
1
primary cell
Biosample term
2
mesenchymal stem cell
2
skeletal muscle fiber
1
Ammon's horn
1
B-lymphoblastoid cell line
1
adipocyte
1
adipose tissue
1
adrenal gland
1
aorta
1
bladder (urinary bladder)
1
dorsolateral prefrontal cortex
1
embryonic stem cell
1
endothelial cell
1
esophagus
1
fibroblast cell line
1
gastric (mucosa of stomach)
1
glial cell
1
heart left ventricle
1
heart right ventricle
1
leukocyte
1
liver
1
lung
1
mesendoderm
1
neural cell
1
neural progenitor cell
1
ovary
1
pancreas
1
psoas muscle
1
right cardiac atrium
1
sigmoid colon
1
skeletal muscle satellite cell
1
small intestine
1
smooth muscle cell
1
spleen
1
thymus
1
trophoblast
1
type I muscle cell
1
type II muscle cell
Organ
1
musculature of body
Date released
1
February, 2024
1
March, 2020
Software used
35
macs
19
r
6
chromhmm
2
encode-ccres
1
abc
1
deeptools
1
nospecificsoft_customcode
1
samtools
1
umitools
Lab
1
AMP-T2D consortium
1
Stephen Parker, UMich
Project
2
AMP
RFA
1
AMP
1
AMP2
biosample_term_name!
pericyte cell
Showing 2 of 2 results
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Download
FileSet
DSR919OZT
released
Annotation file set
: Cell type gene expression mean TPM and bw of skeletal muscle satellite cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR727XIO
released
Annotation file set
: A target gene prediction annotation in Human Neural Prgenitor Cell of GSE86189 pCHi-C
Lab:
AMP-T2D consortium
Project:
AMP