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Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
2
target gene predictions
1
binding sites
1
chromatin state
Annotation Category
4
cis-regulatory elements
2
Target gene links
Annotation type Category
5
ChIP-seq
4
DNase-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
Available data
5
bed bed3+
tsv
1
bed bed9
File set status
6
released
Genome assembly (visualization)
6
hg19
1
GRCh38
Organism
6
Homo sapiens
Biosample type
6
primary cell
0
stem cell
Biosample term
54
common myeloid progenitor, CD34-positive
35
B cell
32
CD4-positive, alpha-beta memory T cell
31
CD14-positive monocyte
22
CD8-positive, alpha-beta memory T cell
19
foreskin keratinocyte
19
mononuclear cell
18
endothelial cell of umbilical vein
17
T cell
17
natural killer cell
16
fibroblast of lung
16
regulatory T cell
16
trophoblast cell
15
CD8-positive, alpha-beta T cell
15
T-helper 1 cell
15
macrophage
14
CD4-positive, alpha-beta T cell
14
T-helper 17 cell
14
T-helper 2 cell
13
endothelial cell
13
fibroblast
13
neurosphere
13
neutrophil
13
pericyte cell
13
skeletal muscle myoblast
12
fibroblast of dermis
12
keratinocyte
11
foreskin fibroblast
11
hepatocyte
11
mammary gland epithelial cell
11
smooth muscle cell
10
dermis blood vessel endothelial cell
10
fibroblast of cardiac tissue
10
monocyte
10
naive thymus-derived CD4-positive, alpha-beta T cell
9
epithelial cell of prostate
9
naive T cell
8
bronchial epithelial cell
8
fibroblast of breast
8
kidney tubule cell
8
myoepithelial cell of mammary gland
8
skeletal muscle satellite cell
7
astrocyte
7
epithelial cell of proximal tubule
7
mature neutrophil
7
skin fibroblast
6
T-cell
6
cardiac muscle cell
6
choroid plexus epithelial cell
6
dermis lymphatic vessel endothelial cell
6
epithelial cell of esophagus
6
erythroblast
6
foreskin melanocyte
6
glomerular endothelial cell
6
kidney epithelial cell
6
kidney glomerular epithelial cell
6
mammary epithelial cell
6
mesenchymal stem cell
6
olfactory receptor cell
6
osteoblast
6
pancreatic delta cell
6
renal cortical epithelial cell
5
CD14-positive, CD16-negative classical monocyte
5
CD4-positive helper T cell
5
alternatively activated macrophage
5
astrocyte of the cerebellum
5
astrocyte of the hippocampus
5
fibroblast of mammary gland
5
fibroblast of pulmonary artery
5
fibroblast of the aortic adventitia
5
fibroblast of villous mesenchyme
5
glomerular visceral epithelial cell
5
luminal epithelial cell of mammary gland
5
lung microvascular endothelial cell
5
naive thymus-derived CD8-positive, alpha-beta T cell
5
pancreatic acinar cell
5
pancreatic alpha cell
5
pancreatic beta cell
5
pancreatic ductal cell
5
retinal pigment epithelial cell
5
skeletal muscle cell
5
smooth muscle cell of the brain vasculature
4
CD1c-positive myeloid dendritic cell
4
astrocyte of the spinal cord
4
basal cell
4
brain microvascular endothelial cell
4
cardiac fibroblast
4
fibroblast of gingiva
4
fibroblast of peridontal ligament
4
fibroblast of the conjunctiva
4
hepatic stellate cell
4
inflammatory macrophage
4
iris pigment epithelial cell
4
kidney capillary endothelial cell
4
memory B cell
4
myofibroblast cell
4
naive B cell
4
non-pigmented ciliary epithelial cell
4
peripheral blood mononuclear cell
4
pulmonary artery endothelial cell
4
skeletal muscle fiber
4
stromal cell of bone marrow
4
type I muscle cell
4
type II muscle cell
4
type II pneumocyte
3
T follicular helper cell
3
activated CD4-positive, alpha-beta T cell
3
amnion mesenchymal stem cell
3
amniotic stem cell
3
blood cell
3
colon epithelial cell
3
cortical cell of adrenal gland
3
enterocyte
3
epidermal melanocyte
3
epithelial cell of amnion
3
mammary stem cell
3
pancreatic A cell
3
pancreatic polypeptide-secreting cell
3
regular cardiac myocyte
3
smooth muscle cell of the coronary artery
3
type B pancreatic cell
2
cardiac fibroblast
2
Schwann cell
2
activated CD8-positive, alpha-beta T cell
2
adipocyte
2
blood vessel smooth muscle cell
2
brain pericyte
2
capillary endothelial cell
2
central memory CD8-positive, alpha-beta T cell
2
ciliated cell
2
club cell
2
dermis microvascular lymphatic vessel endothelial cell
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
effector memory CD8-positive, alpha-beta T cell
2
endothelial cell of lymphatic vessel
2
enteric smooth muscle cell
2
extracellular matrix secreting cell
2
fat cell
2
gabaergic neuron
2
gamma-delta T cell
2
glutamatergic neuron
2
goblet cell
2
mast cell
2
mature natural killer cell
2
megakaryocyte
2
memory T cell
2
memory regulatory T cell
2
mesothelial cell
2
microglial cell
2
naive regulatory T cell
2
naive t cell
2
pancreatic stellate cell
2
parietal cell
2
peptic cell
2
plasma cell
2
plasmacytoid dendritic cell
2
smooth muscle cell of the esophagus
2
thyroid follicular cell
2
type I pneumocyte
2
vascular associated smooth muscle cell
1
brain microvascular endothelial cell
1
retinal pigment epithelial cell
1
B cell, CD19-positive
1
CD34-PB
1
CD34-negative, CD41-positive, CD42-positive megakaryocyte cell
1
CD4-positive, CD25-positive, alpha-beta regulatory T cell
1
CD56-positive, CD161-positive immature natural killer cell
1
H1-hESC
1
Heart fetal (cardiac muscle cell)
1
Leydig cell
1
Liver fetal (hepatocyte)
1
Satellite Cells, Skeletal Muscle
1
adult endothelial progenitor cell
1
alveolar macrophage
1
amniotic epithelial cell
1
aortic adventitial fibroblast
1
basal cell of epidermis
1
bronchial goblet cell
1
cardiac atrium fibroblast
1
cardiac endothelial cell
1
cardiac ventricle fibroblast
1
cell
1
colon goblet cell
1
conventional dendritic cell
1
eccrine cell
1
effector memory CD4-positive, alpha-beta T cell
1
endocardial cell
1
endothelial cell of artery
1
endothelial cell of coronary artery
1
enteric neuron
1
enterochromaffin-like cell
1
enterocyte of epithelium of small intestine
1
erythrocyte
1
fibroblast of arm
1
fibroblast of skin of abdomen
1
fibroblast of skin of back
1
fibroblast of skin of right quadriceps
1
foveolar cell of stomach
1
glial cell
Organ
6
connective tissue
Life stage
4
unknown
Date released
3
September, 2022
1
February, 2021
1
May, 2021
1
October, 2022
Software used
macs
2
chromhmm
2
r
1
abc
1
encode-ccres
Lab
5
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
6
AMP
RFA
6
AMP
files.file_type!
tsv
software_used.software.name!
macs
Showing 6 of 6 results
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Download
FileSet
DSR030CGL
released
Annotation file set
: Binding sites annotation for osteoblast (Osteobl) for GOLDENPATH ENCODE DCC
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR292OXQ
released
Annotation file set
: Candidate regulatory elements for BSS01397 osteoblast from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR608JCL
released
Annotation file set
: Target gene predictions for BSS01397 osteoblast from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR768TZR
released
Annotation file set
: Chromatin states for BSS01397 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR515FLX
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE osteoblast
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR069ZRF
released
Annotation file set
: enhancer-gene predicton of osteoblast-ENCODE from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP