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Assay category
4
DNA accessibility
1
3D chromatin structure
1
DNA methylation
1
Transcription
Assay
4
snATAC-seq
1
Hi-C
1
RRBS
1
pCHi-C
1
total RNA-seq
Project
4
AMP
4
T1D
RFA
4
AMP
4
T1D
Experiment status
8
released
Genome assembly (visualization)
2
hg19
Organism
8
Homo sapiens
Biosample type
8
tissue
Organ
8
pancreas
Life stage
4
adult
2
child
1
embryonic
1
unknown
Available data
bam
19
bigWig
19
fastq
16
bed narrowPeak
16
bigBed narrowPeak
8
bed broadPeak
7
tagAlign
3
bed bedMethyl
3
bigBed bedMethyl
2
bed bed3+
2
bigBed broadPeak
2
tsv
1
bedpe bed3+
1
hic
Library made from
7
DNA
1
RNA
Date released
4
January, 2021
2
March, 2020
1
July, 2019
1
May, 2021
Lab
5
Kyle Gaulton, UCSD
3
AMP-T2D consortium
Replication type
3
isogenic
3
unreplicated
2
anisogenic
files.file_type!
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Showing 8 of 8 results
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Experiment
DSR306MQC
released
total RNA-seq
of pancreas
Homo sapiens
pancreas embryo (54-58 days)
Lab:
Kyle Gaulton, UCSD
Project:
AMP
Experiment
DSR346BYL
released
snATAC-seq
of pancreas
Homo sapiens
pancreas male child (9 years)
Lab:
Kyle Gaulton, UCSD
Project:
T1D
Experiment
DSR438WOP
released
snATAC-seq
of pancreas
Homo sapiens
pancreas male adult (33 years)
Lab:
Kyle Gaulton, UCSD
Project:
T1D
Experiment
DSR154TPS
released
snATAC-seq
of pancreas
Homo sapiens
pancreas female adult (33 years)
Lab:
Kyle Gaulton, UCSD
Project:
T1D
Experiment
DSR498EST
released
snATAC-seq
of pancreas
Homo sapiens
pancreas male child (14 years)
Lab:
Kyle Gaulton, UCSD
Project:
T1D
Experiment
DSR832PWS
released
pCHi-C
of pancreas
Homo sapiens
pancreas
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR905BNL
released
Hi-C
of pancreas
Homo sapiens
pancreas female adult (30 years) and male adult (34 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR015YSF
released
RRBS
of pancreas
Homo sapiens
pancreas male adult (71 year)
Lab:
AMP-T2D consortium
Project:
AMP