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Assay category
6
DNA methylation
1
Transcription
Assay
6
WGBS
1
single cell RNA-seq
Project
6
HPAP
1
AMP
RFA
6
HPAP
1
AMP
Experiment status
7
released
Genome assembly (visualization)
1
GRCh38
1
hg19
Organism
7
Homo sapiens
Biosample type
7
primary cell
Organ
7
epithelium
7
pancreas
Life stage
5
adult
2
child
Available data
7
fastq
7
tsv
1
bam
1
bigWig
Platform
6
Illumina NovaSeq 6000
Illumina NextSeq 500
1
Illumina HiSeq 4000
Run type
7
paired-ended
2
single-ended
Read length (nt)
6
100
1
140
Library insert size (nt)
1
>200
Library made from
6
DNA
1
RNA
Date released
6
February, 2021
1
July, 2018
Lab
6
Klaus Kaestner, Upenn
1
AMP-T2D consortium
Replication type
unreplicated
6
isogenic
1
anisogenic
files.platform.term_name!
Illumina HiSeq 2500
Illumina NextSeq 500
replication_type!
unreplicated
Showing 7 of 7 results
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Experiment
DSR163MXE
released
WGBS
of pancreatic alpha cell
Homo sapiens
pancreatic alpha cell male child (3 years)
Lab:
Klaus Kaestner, Upenn
Project:
HPAP
Experiment
DSR992DXL
released
WGBS
of pancreatic alpha cell
Homo sapiens
pancreatic alpha cell female adult (24 years)
Lab:
Klaus Kaestner, Upenn
Project:
HPAP
Experiment
DSR248ORP
released
WGBS
of pancreatic alpha cell
Homo sapiens
pancreatic alpha cell male adult (46 years)
Lab:
Klaus Kaestner, Upenn
Project:
HPAP
Experiment
DSR791IRT
released
WGBS
of pancreatic alpha cell
Homo sapiens
pancreatic alpha cell female child (14 years)
Lab:
Klaus Kaestner, Upenn
Project:
HPAP
Experiment
DSR622ITI
released
WGBS
of pancreatic alpha cell
Homo sapiens
pancreatic alpha cell female adult (24 years)
Lab:
Klaus Kaestner, Upenn
Project:
HPAP
Experiment
DSR892CSM
released
WGBS
of pancreatic alpha cell
Homo sapiens
pancreatic alpha cell male adult (29 years)
Lab:
Klaus Kaestner, Upenn
Project:
HPAP
Experiment
TSTSR887119
released
single cell RNA-seq
of pancreatic alpha cell
Homo sapiens
pancreatic alpha cell female adult (49 years) and male adult (65 years)
Lab:
AMP-T2D consortium
Project:
AMP