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Clear Filters
Annotation type
  • 2accessible chromatin
  • 2gene expression
  • 1target gene predictions
  • 1variant allelic effects
Annotation Category
  • 2Gene expression levels
  • 2cis-regulatory elements
  • 1Genetic variant effects
  • 1Target gene links
Annotation type Category
  • 4snATAC-seq
  • 2scRNA-seq
Available data
  • 4bed bed3+
  • 3bigWig
  • 2bigBed narrowPeak
  • 1tsv
File set status
  • 6released
Genome assembly (visualization)
  • 4hg19
Organism
  • 6Homo sapiens
Biosample type
  • 6primary cell
Biosample term
  • 45islet of Langerhans
  • 25pancreatic ductal cell
  • 24body of pancreas
  • 22pancreas
  • 21EndoC_BH1
  • 18pancreatic acinar cell
  • 18pancreatic beta cell
  • 17pancreatic alpha cell
  • 16pancreatic delta cell
  • 15endocrine pancreas
  • 10pancreatic stellate cell
  • 6pancreatic polypeptide-secreting cell
  • 5Panc1
  • 4pancreatic A cell
  • 4pancreatic alpha+beta cell
  • 4pancreatic cycling alpha cell
  • 4pancreatic gamma+epsilon cell
  • 4type B pancreatic cell
  • 38988T
  • 3HPDE6-E6E7
  • 3pancreatic quiescent stellate cell
  • 2pancreatic endocrine cell
  • 1activated pancreatic stellate cell
  • 1pancreatic D cell
  • 1pancreatic PP cell
  • 1quiescent pancreatic stellate cell
Organ
  • 6epithelium
  • 6pancreas
Life stage
  • 3adult
Date released
  • 2February, 2024
  • 2January, 2021
  • 1August, 2018
  • 1May, 2021
Software used
  • 2macs
  • 2r
  • 1cicero
  • 1deltasvm
Lab
  • 4Kyle Gaulton, UCSD
  • 2AMP-T2D consortium
Project
  • 4AMP
  • 2T1D
Collection Tags
  • 2 T2DKP
  • 2T1D
  • 2T2DKP
  • 1AMP
  • 1DGA
RFA
  • 4AMP
  • 2T1D

Showing 6 of 6 results

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  • FileSet

    DSR134GXZ

    released

    Annotation file set: GSE84133 Gene expression levels (pseudobulks UMI) of pancreatic polypeptide-secreting cell
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR056HMW

    released

    Annotation file set: coaccessible target genes annotation from snATAC-seq of gamma
    Lab: Kyle Gaulton, UCSD
    Project: T1D
  • FileSet

    DSR550HPP

    released

    Annotation file set: accessible chromatin annotation from snATAC-seq of gamma
    Lab: Kyle Gaulton, UCSD
    Project: T1D
  • FileSet

    DSR260PUK

    released

    Annotation file set: Genetic variants with deltaSVM predictions in pancreatic gamma cell snATAC
    Lab: Kyle Gaulton, UCSD
    Project: AMP
  • FileSet

    DSR614CXC

    released

    Annotation file set: pancreatic gamma cell accessible chromatin annotation from snATAC
    Lab: Kyle Gaulton, UCSD
    Project: AMP
  • FileSet

    TSTSR233YGC

    released

    Annotation file set: pancreatic polypeptide cell TPM gene expreassion matrix and statistic summary from scRNA-seq publications for non-diabetic adults
    Lab: AMP-T2D consortium
    Project: AMP
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