Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Clear Filters
Annotation type
3
differential activity
2
gene expression
Annotation Category
5
Gene expression levels
Annotation type Category
5
scRNA-seq
Available data
bed bed3+
4
bigWig
4
tsv
1
bigBed narrowPeak
File set status
5
released
Organism
5
Homo sapiens
Biosample type
5
primary cell
Biosample term
2636
whole blood
24
heart
23
kidney
20
stomach
19
brain
18
A549
18
monocyte
17
epithelial cell of proximal tubule
17
islet of Langerhans
17
liver
17
lung
16
glomerular endothelial cell
16
induced pluripotent stem cell
16
muscle of arm
16
subcutaneous adipose tissue
15
adrenal gland
15
hepatocyte
15
muscle of leg
15
small intestine
14
placenta
13
common myeloid progenitor, CD34-positive
13
large intestine
13
left lung
13
muscle of back
12
neural progenitor cell
11
EndoC_BH1
11
cardiomyocytes
11
hematopoietic multipotent progenitor cell
11
right kidney
11
right lung
11
thymus
10
B cell
10
T-helper 1 cell
10
T-helper 17 cell
10
adipose tissue
10
body of pancreas
10
endothelial cell
10
pancreatic ductal cell
10
regulatory T cell
10
tibial nerve
9
CD4-positive, alpha-beta memory T cell
9
H1-hESC
9
caudate nucleus
9
extended pluripotent stem (EPS) cells
9
heart left ventricle
9
left kidney
9
omental fat pad
9
progenitor cell of endocrine pancreas
9
renal cortex interstitium
9
renal pelvis
8
ascending aorta
8
cerebellum
8
coronary artery
8
frontal cortex
8
right atrium auricular region
8
tibial artery
7
CD8-positive, alpha-beta memory T cell
7
embryonic stem cell
7
kidney loop of Henle thin ascending limb epithelial cell
7
mature neutrophil
7
pancreatic acinar cell
7
putamen
7
spinal cord
7
spleen
7
substantia nigra
6
Ammon's horn
6
K562
6
T-helper 2 cell
6
aorta wall
6
blood serum
6
glomerular visceral epithelial cell
6
heart right ventricle
6
kidney interstitial cell
6
mononuclear cell
6
pancreatic alpha cell
6
pancreatic beta cell
6
pancreatic delta cell
6
right lobe of liver
6
skeletal muscle
5
Adaptive / Maladaptive / Repairing Fibroblast
5
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
5
Afferent / Efferent Arteriole Endothelial Cell
5
B Cell
5
C1 segment of cervical spinal cord
5
CD14-positive, CD16-negative classical monocyte
5
Classical Dendritic Cell
5
Connecting Tubule Cell
5
Connecting Tubule Intercalated Cell Type A
5
Connecting Tubule Principal Cell
5
Cortical Thick Ascending Limb Cell
5
Cycling Endothelial Cell
5
Cycling Epithelial Cell
5
Cycling T Cell
5
Cytotoxic T Cell
5
Degenerative Connecting Tubule Cell
5
Degenerative Connecting Tubule Cell / Principal Cell
5
Degenerative Cortical Thick Ascending Limb Cell
5
Degenerative Distal Convoluted Tubule Cell
5
Degenerative Intercalated Cell Type A
5
Degenerative Peritubular Capillary Endothelial Cell
5
Degenerative Principal Cell
5
Degenerative Proximal Tubule Epithelial Cell
5
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
5
Degenerative Vascular Smooth Muscle Cell
5
Descending Thin Limb Cell Type 1
5
Distal Convoluted Tubule Cell Type 1
5
Fibroblast
5
Glomerular Capillary Endothelial Cell
5
Intercalated Cell Type A
5
Intercalated Cell Type B
5
Lymphatic Endothelial Cell
5
M2 Macrophage
5
MCF-7
5
Medullary Thick Ascending Limb Cell
5
Mesangial Cell
5
Monocyte
5
Monocyte-derived Cell
5
Myofibroblast
5
Natural Killer T Cell
5
Natural Killer T Cell Type 1
5
Natural Killer T Cell Type 2
5
Non-Classical Monocyte
5
Parietal Epithelial Cell
5
Peritubular Capillary Endothelial Cell
5
Plasma Cell
5
Plasmacytoid Dendritic Cell
5
Podocyte
5
Principal Cell
5
Proximal Tubule Epithelial Cell Segment 1 and 2
5
Proximal Tubule Epithelial Cell Segment 3
5
Regulatory T Cell
5
Renin-positive Juxtaglomerular Granular Cell
5
T Cell
5
Transitional Principal-Intercalated Cell
5
Vascular Smooth Muscle Cell / Pericyte
5
alternatively activated macrophage
5
amygdala
5
anterior cingulate cortex
5
aorta
5
cerebellum (Hemisphere)
5
endothelial cell of umbilical vein
5
gastrocnemius medialis(Muscle - Skeletal)
5
hypothalamus
5
kidney cortex collecting duct principal cell
5
kidney loop of Henle thick ascending limb epithelial cell
5
left ventricle myocardium
5
macrophage
5
mesangial cell
5
natural killer cell
5
neutrophil
5
nucleus accumbens
5
ovary
5
pancreatic stellate cell
5
sigmoid colon
5
temporal lobe
5
trophoblast cell
5
visceral fat
4
CD14-positive monocyte
4
CD8-positive, alpha-beta T cell
4
T cell
4
adipocyte
4
angular gyrus
4
articular chondrocyte
4
bone tissue
4
cardiac precursors (cardiac muscle cell)
4
cardiomyocytes (cardiac muscle cell)
4
chorionic villus
4
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
4
endocrine pancreas
4
endothelial cell of hepatic sinusoid
4
foreskin keratinocyte
4
gamma-delta T cell
4
gastrocnemius medialis
4
inflammatory macrophage
4
internal thoracic artery
4
kidney connecting tubule epithelial cell
4
kidney distal convoluted tubule epithelial cell
4
mesenchymal stem cell
4
muscle of trunk
4
naive thymus-derived CD4-positive, alpha-beta T cell
4
nephron progenitor
4
pancreatic MUC5B+ductal cell
4
pancreatic alpha+beta cell
4
pancreatic cycling alpha cell
4
pancreatic endothelial cell
4
pancreatic gamma+epsilon cell
4
pancreatic macrophage cell
4
pancreatic mast cell
4
psoas muscle
4
retina
4
right cardiac atrium
4
skeletal muscle myoblast
4
skeletal muscle satellite cell
4
skeletal muscle tissue
4
testis
4
thyroid gland
4
transverse colon
3
CD4-positive, alpha-beta T cell
Organ
5
connective tissue
5
pancreas
Date released
4
March, 2023
1
August, 2018
Software used
5
r
Lab
4
Kyle Gaulton, UCSD
1
AMP-T2D consortium
Project
5
AMP
Collection Tags
4
HPAP
1
DGA
RFA
5
AMP
files.file_type!
bed bed3+
Showing 5 of 5 results
table-tab-icon
matrix-icon
Download
FileSet
DSR605WTO
released
Annotation file set
: Differential activity within stellate in T2D
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
DSR550RUB
released
Annotation file set
: Differential activity within stellate in T1D
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
DSR764LFW
released
Annotation file set
: Differential activity within stellate in T1D Aab+
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
DSR457DGF
released
Annotation file set
: Gene expression annotation of pancreatic stellate from single-cell transcriptome analysis
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
TSTSR656WJC
released
Annotation file set
: pancreatic stellate cell TPM gene expreassion matrix and statistic summary from scRNA-seq publications for non-diabetic adults
Lab:
AMP-T2D consortium
Project:
AMP