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Annotation type
1
accessible chromatin
1
target gene predictions
1
variant allelic effects
Annotation Category
1
Genetic variant effects
1
Target gene links
1
cis-regulatory elements
Annotation type Category
2
snATAC-seq
1
ATAC-seq
Available data
3
bed bed3+
1
bigWig
File set status
3
released
Genome assembly (visualization)
3
hg19
2
GRCh38
Organism
3
Homo sapiens
Biosample type
3
primary cell
Biosample term
86
stomach
9
stomach smooth muscle
7
gastroesophageal sphincter
4
mucosa of stomach
3
parietal cell
3
peptic cell
2
foveolar cell of stomach
2
stomach neuroendocrine cell
1
esophagus - gastroesophageal junction
1
gastric (mucosa of stomach)
1
gastric goblet cell
Organ
3
epithelium
3
stomach
Date released
2
November, 2021
1
February, 2024
Software used
1
abc
1
deltasvm
1
macs
Lab
3
Bing Ren, UCSD
Project
2
ENCODE
1
AMP
Collection Tags
2
AMP
2
T2DKP
1
DGA
RFA
2
ENCODE3
1
AMP
Showing 3 of 3 results
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Download
FileSet
DSR771TGI
released
Annotation file set
: Target gene predictions of Chief Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR570UBU
released
Annotation file set
: Accessible chromatin annotation of Chief Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR552HSG
released
Annotation file set
: Variant allelic effects annotation of Gastric chief cells from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
AMP