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Citing CMDGA
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Annotation type
1
accessible chromatin
Annotation Category
1
cis-regulatory elements
Annotation type Category
1
snATAC-seq
Available data
1
bed bed3+
1
bigWig
File set status
1
released
Genome assembly (visualization)
1
GRCh38
1
hg19
Organism
1
Homo sapiens
Biosample type
1
primary cell
Biosample term
67
muscle of arm
58
muscle of leg
54
H1-hESC
34
spleen
25
tibial nerve
23
trophoblast cell
19
tibial artery
18
gastrocnemius medialis
18
testis
16
H9
16
chorionic villus
11
trophoblast
10
endodermal cell
10
lower leg skin
8
limb
8
mesodermal cell
7
GM23248
6
H7-hESC
6
HUES6
6
HUES8
6
NT2-D1 cell
5
CyT49
5
H4
5
HUES64
5
ectodermal cell
5
gastrocnemius medialis(Muscle - Skeletal)
4
ELF-1
4
HUES48
4
UCSF-4
4
embryonic facial prominence
4
femur
3
ES-I3
3
arm bone
3
cardiac mesoderm primordium
3
hESC H9
3
leg bone
3
primordial germ cell
2
hindlimb muscle
2
muscle of leg
2
first pancreatic bud
2
forelimb muscle
2
skin of forearm
1
H1
1
H7
1
Leydig cell
1
NT2/D1
1
cardiogenic mesoderm
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
embryonic fibroblast
1
fibroblast of arm
1
hindlimb muscle
1
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
morula
1
placental hematopoietic stem cell
1
proximal epiphysis of femur
1
proximal epiphysis of humerus
1
proximal epiphysis of tibia
1
skin - sun exposed (lower leg)
1
trophoblast giant cell
Organ
1
embryo
1
extraembryonic component
1
placenta
0
limb
0
spleen
0
testis
Date released
1
November, 2021
Software used
1
macs
Lab
1
Bing Ren, UCSD
Project
1
ENCODE
RFA
1
ENCODE3
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Download
FileSet
DSR983RIG
released
Annotation file set
: Accessible chromatin annotation of Fetal Hematopoeitic Stem Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE