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Annotation type
1
variant allelic effects
Annotation Category
1
Genetic variant effects
Annotation type Category
1
SNP-SELEX
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Biosample term
11
pancreatic alpha cell
11
pancreatic beta cell
11
pancreatic delta cell
9
pancreatic ductal cell
9
pancreatic stellate cell
8
pancreatic acinar cell
6
endothelial cell
5
macrophage
5
natural killer cell
5
pancreatic endothelial cell
4
pancreatic MUC5B+ductal cell
4
pancreatic alpha+beta cell
4
pancreatic cycling alpha cell
4
pancreatic gamma+epsilon cell
4
pancreatic macrophage cell
4
pancreatic mast cell
4
pancreatic polypeptide-secreting cell
3
B cell
3
endothelial cell of lymphatic vessel
3
fibroblast
3
mast cell
3
pancreatic quiescent stellate cell
2
CD8-positive, alpha-beta T cell
2
activated CD4-positive, alpha-beta T cell
2
activated CD8-positive, alpha-beta T cell
2
adipocyte
2
conventional dendritic cell
2
endocardial cell
2
islet of Langerhans
2
megakaryocyte
2
memory B cell
2
monocyte
2
naive B cell
2
naive thymus-derived CD4-positive, alpha-beta T cell
2
naive thymus-derived CD8-positive, alpha-beta T cell
2
natural killer cell mediated cytotoxicity
2
neuronal stem cell
2
non-classical monocyte
2
pericyte cell
2
plasmacytoid dendritic cell
2
regular ventricular cardiac myocyte
2
regulatory T cell
2
smooth muscle cell
2
stellate neuron
1
Pancreatic islets
1
Schwann cell
1
dendritic cell
1
erythrocyte
1
hepatic stellate cell
1
hepatocyte
1
myofibroblast cell
1
pancreatic A cell
1
pancreatic D cell
1
pancreatic PP cell
1
pancreatic immune cell
1
purified protein and synthetic DNA oligo binding assay
1
tissue-resident macrophage
1
type B pancreatic cell
Date released
1
February, 2023
Software used
1
betacells_cytokines_t1d
Lab
1
Kyle Gaulton, UCSD
Project
1
T1D
Collection Tags
1
AMP
1
DGA
RFA
1
T1D
Showing 1 of 1 results
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FileSet
DSR976GBT
released
Annotation file set
: High-throughput analysis of the binding of human transcription factors to common sequence variants by SNP-SELEX (in-silico assay)
Lab:
Kyle Gaulton, UCSD
Project:
T1D