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Schema
Clear Filters
Annotation type
1
accessible chromatin
1
target gene predictions
Annotation Category
1
Target gene links
1
cis-regulatory elements
Annotation type Category
1
ATAC-seq
1
snATAC-seq
Available data
2
bed bed3+
1
bigWig
File set status
2
released
Genome assembly (visualization)
2
GRCh38
2
hg19
Organism
2
Homo sapiens
Biosample type
2
primary cell
Biosample term
2636
whole blood
135
monocyte
107
stomach
95
kidney
89
brain
86
head of caudate nucleus
84
muscle of arm
82
lung
82
placenta
81
endothelial cell
77
adrenal gland
77
fibroblast
76
A549
76
small intestine
73
CD8-positive, alpha-beta T cell
71
muscle of leg
70
large intestine
69
muscle of back
68
HeLa-S3
68
T-cell
67
left lung
66
common myeloid progenitor, CD34-positive
64
CD4-positive, alpha-beta T cell
62
macrophage
61
smooth muscle cell
59
dorsolateral prefrontal cortex
57
B cell
57
thymus
56
right lung
55
hematopoietic multipotent progenitor cell
55
stimulated activated CD4-positive, alpha-beta T cell
54
H1-hESC
52
hepatocyte
52
neural progenitor cell
52
right kidney
51
renal cortex interstitium
50
liver
50
renal pelvis
48
K562
48
posterior cingulate gyrus
45
islet of Langerhans
45
left kidney
43
retina
41
natural killer cell
41
spinal cord
39
CD14-positive monocyte
39
spleen
38
adipocyte
37
CD4-positive, alpha-beta memory T cell
37
T cell
33
MCF-7
33
activated CD4-positive, alpha-beta T cell
33
keratinocyte
32
T-helper 1 cell
32
glutamatergic neuron
31
adipose tissue
31
astrocyte
31
pancreatic ductal cell
29
ovary
28
T-helper 17 cell
28
body of pancreas
28
pancreas
28
regulatory T cell
28
tibial nerve
28
trophoblast cell
27
naive thymus-derived CD4-positive, alpha-beta T cell
26
CD8-positive, alpha-beta memory T cell
26
T-helper 2 cell
26
epithelial cell of proximal tubule
25
cardiac muscle cell
25
psoas muscle
25
stimulated activated CD8-positive, alpha-beta memory T cell
24
foreskin keratinocyte
24
gastrocnemius medialis
24
sigmoid colon
23
EndoC_BH1
23
H9
23
caudate nucleus
23
foreskin fibroblast
23
upper lobe of left lung
22
GABAergic neuron
22
HCT116
22
endothelial cell of umbilical vein
22
glomerular endothelial cell
22
pericyte cell
22
thyroid gland
21
pericyte
21
testis
21
tibial artery
20
breast cancer cell
20
mesenchymal stem cell
20
mononuclear cell
20
naive thymus-derived CD8-positive, alpha-beta T cell
20
subcutaneous adipose tissue
20
transverse colon
19
HFFc6
19
HepG2
19
hepatic stellate cell
19
omental fat pad
18
ascending aorta
18
embryonic stem cell
18
muscle of trunk
18
pancreatic beta cell
18
pigmented layer of retina
17
Peyer's patch
17
dendritic cell
17
erythroblast
17
fibroblast of lung
17
frontal cortex
17
neuron
16
GM12878
16
cerebellum
16
chorionic villus
16
endothelial cell of hepatic sinusoid
16
induced pluripotent stem cell
16
layer of hippocampus
16
left renal cortex interstitium
16
skeletal muscle satellite cell
16
substantia nigra
15
activated T-cell
15
bronchial epithelial cell
15
mammary epithelial cell
15
mammary gland epithelial cell
15
pancreatic acinar cell
15
pancreatic alpha cell
15
pancreatic delta cell
15
retinal pigment epithelial cell
15
skeletal muscle myoblast
14
activated CD8-positive, alpha-beta memory T cell
14
aorta
14
endocrine pancreas
14
endothelial cell of lymphatic vessel
14
osteoblast
14
right renal pelvis
14
skeletal muscle tissue
13
breast epithelium
13
dermis blood vessel endothelial cell
13
excitatory neuron
13
fibroblast of dermis
13
glomerular visceral epithelial cell
13
naive B cell
13
prostate gland
13
putamen
12
Ammon's horn
12
SK-N-DZ
12
colonic mucosa
12
epithelial cell of prostate
12
left renal pelvis
12
lymphoblastoid cell line
11
IMR-90
11
SK-N-SH
11
choroid plexus epithelial cell
11
esophagus muscularis mucosa
11
kidney tubule cell
11
mast cell
11
neurosphere
11
neutrophil
11
progenitor cell of endocrine pancreas
11
thoracic aorta
10
Rhabdomyosarcoma
10
endodermal cell
10
esophagus squamous epithelium
10
foreskin melanocyte
10
gastric cancer cell
10
inflammatory macrophage
10
limb
10
neuroblastoma cell
10
thyroid follicular cell
9
22Rv1
9
GM06990
9
HAP-1
9
HT-29
9
PC-9
9
SK-N-MC
9
WERI-Rb-1
9
WI38
9
cardiomyocytes
9
diffuse intrinsic pontine glioma
9
esophagus
9
eye
9
globus pallidus
9
lower leg skin
9
neuronal stem cell
9
progenitor cell
9
temporal lobe
9
tongue
8
B Cell
8
GM12864
8
GM12865
8
HEK293
8
LNCaP clone FGC
8
MM.1S
8
NAMALWA cell
8
OCI-LY7
8
T47D
8
cingulate gyrus
8
colon epithelial cell
8
duodenal mucosa
8
epithelial cell of esophagus
8
fibroblast cell line
Organ
heart
Date released
2
November, 2021
Software used
1
abc
1
macs
Lab
2
Bing Ren, UCSD
Project
2
ENCODE
Collection Tags
2
AMP
2
T2DKP
RFA
2
ENCODE3
organ_slims!
heart
Showing 2 of 2 results
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Download
FileSet
DSR922IZF
released
Annotation file set
: Target gene predictions of Atrial Cardiomyocyte from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR861HQN
released
Annotation file set
: Accessible chromatin annotation of Atrial Cardiomyocyte from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE