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Clear Filters
Annotation type
  • 7accessible chromatin
Annotation Category
  • 7cis-regulatory elements
Annotation type Category
  • 7ATAC-seq
Available data
  • 7bed bed3+
  • 4bigWig
File set status
  • 7released
Genome assembly (visualization)
  • 7hg19
Organism
  • 7Homo sapiens
Biosample type
  • 7tissue
Biosample term
  • 9pigmented layer of retina
  • 7retina
  • 6retinal pigment epithelial cell
  • 5chondrocyte
  • 4glutamatergic neuron
  • 3SGBS preadipocytes
  • 1Progenitor cell of Hypothalamus (neural progenitor cell)
  • 1adipocyte
  • 1adipose tissue
  • 1embryonic stem cell
  • 1gabaergic neuron
  • 1microglial cell/astrocyte
  • 1neuron
  • 1neuron cell of Hypothalamus (neuron)
  • 1non-neuronal cell
  • 1oligodendrocyte
Organ
  • 7eye
Life stage
  • 7adult
Date released
  • 14February, 2023
  • 9September, 2022
  • 7November, 2022
  • 5February, 2021
  • 2February, 2020
  • 1January, 2020
  • 1June, 2020
  • 1May, 2020
Software used
  • 7macs
Lab
  • 7AMP-T2D consortium
Project
  • 7AMP
Collection Tags
  • 7CMDGA
RFA
  • 7AMP

Showing 7 of 7 results

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  • FileSet

    DSR650KSB

    released

    Annotation file set: Accessible chromation annotation of differentially accessible regions (DARs) in the retina identified by linear regression modeling of AMD and normal samples (Supplementary Data 5)
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR419MDG

    released

    Annotation file set: Accessible chromation annotation of differential ATAC-Seq peaks of macular vs. peripheral retinal samples from normal eyes (Supplementary Data 3)
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR777QET

    released

    Annotation file set: Accessible chromation annotation of ATAC-Seq peaks from all retinal samples (Supplementary Data 1)
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR867MCR

    released

    Annotation file set: Accessible chromation annotation of ATAC-seq of Retina from Periphery on the Right eye of LateAMD
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR041MMC

    released

    Annotation file set: Accessible chromation annotation of ATAC-seq of Retina from Periphery on the Left eye of LateAMD
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR425JXY

    released

    Annotation file set: Accessible chromation annotation of ATAC-seq of Retina from Macula on the Right eye of LateAMD
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR270YZO

    released

    Annotation file set: Accessible chromation annotation of ATAC-seq of Retina from Macula on the Left eye of LateAMD
    Lab: AMP-T2D consortium
    Project: AMP
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