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Clear Filters
Annotation type
  • 6accessible chromatin
Annotation Category
  • 6cis-regulatory elements
Annotation type Category
  • 6ATAC-seq
Available data
  • 6bed bed3+
  • 2bigWig
File set status
  • 6released
Genome assembly (visualization)
  • 6hg19
Organism
  • 6Homo sapiens
Biosample type
  • 6in vitro differentiated cells
Biosample term
  • 9pigmented layer of retina
  • 7retina
  • 6retinal pigment epithelial cell
  • 5chondrocyte
  • 4glutamatergic neuron
  • 3SGBS preadipocytes
  • 1Progenitor cell of Hypothalamus (neural progenitor cell)
  • 1adipocyte
  • 1adipose tissue
  • 1embryonic stem cell
  • 1gabaergic neuron
  • 1microglial cell/astrocyte
  • 1neuron
  • 1neuron cell of Hypothalamus (neuron)
  • 1non-neuronal cell
  • 1oligodendrocyte
Organ
  • 6epithelium
  • 6eye
Date released
  • 6November, 2022
  • 3February, 2021
  • 3September, 2022
  • 1January, 2020
  • 1June, 2020
  • 1November, 2021
  • 1October, 2022
Software used
  • 6macs
Lab
  • 6AMP-T2D consortium
Project
  • 6AMP
Collection Tags
  • 6CMDGA
RFA
  • 6AMP

Showing 6 of 6 results

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  • FileSet

    DSR246ESC

    released

    Annotation file set: Accessible chromation annotation of ATAC-seq of retinal pigment epithelial cell using nonviral (EP1) with cigarette smoke extract (CSE) treatment
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR287DMU

    released

    Annotation file set: Accessible chromation annotation of ATAC-seq of retinal pigment epithelial cell using viral (IMR90.4) with cigarette smoke extract (CSE) treatment
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR141IRH

    released

    Annotation file set: Accessible chromation annotation of ATAC-seq of retinal pigment epithelial cell using viral (IMR90.4) ctrl
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR332MGG

    released

    Annotation file set: Accessible chromation annotation of ATAC-seq of retinal pigment epithelial cell using nonviral (EP1) overexpression of HDAC11
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR011XGG

    released

    Annotation file set: Accessible chromation annotation of ATAC-seq of retinal pigment epithelial cell using nonviral (EP1) empty
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR497CTZ

    released

    Annotation file set: Accessible chromation annotation of ATAC-seq of retinal pigment epithelial cell using nonviral (EP1) ctrl
    Lab: AMP-T2D consortium
    Project: AMP
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