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Assay category
4
DNA binding
2
DNA accessibility
Assay
4
ChIP-seq
1
ATAC-seq
1
DNase-seq
Project
6
AMP
RFA
6
AMP
Experiment status
6
released
Genome assembly (visualization)
4
GRCh38
4
hg19
Organism
6
Homo sapiens
Target of assay
2
control
2
transcription factor
1
RNA binding protein
Biosample type
6
tissue
Organ
6
liver
Life stage
6
adult
Available data
6
bam
6
fastq
4
bed narrowPeak
4
bigBed narrowPeak
4
bigWig
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
Platform
6
Illumina HiSeq 2500
6
Illumina HiSeq 4000
Run type
6
paired-ended
Read length (nt)
5
100
1
36
Library insert size (nt)
1
150-250
Library made from
6
DNA
Date released
4
December, 2017
1
August, 2017
1
November, 2018
Lab
6
AMP-T2D consortium
Replication type
6
unreplicated
Showing 6 of 6 results
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Experiment
TSTSR678CGC
released
DNase-seq
of right lobe of liver
Homo sapiens
right lobe of liver female adult (53 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR754274
released
ChIP-seq
of right lobe of liver
Homo sapiens
right lobe of liver female adult (53 years)
Target:
POLR2A
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR180005
released
ChIP-seq
of right lobe of liver
Homo sapiens
right lobe of liver female adult (53 years)
Target:
Control
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR845431
released
ChIP-seq
of right lobe of liver
Homo sapiens
right lobe of liver female adult (53 years)
Target:
CTCF
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR451750
released
ChIP-seq
of right lobe of liver
Homo sapiens
right lobe of liver female adult (53 years)
Target:
Control
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR622315
released
ATAC-seq
of right lobe of liver
Homo sapiens
right lobe of liver female adult (53 years)
Lab:
AMP-T2D consortium
Project:
AMP