Search – Common Metabolic Diseases Genome Atlas

Showing 12 of 12 results

FileSet
DSR102339
released
Annotation file set: The dataset contains differentially accessible cCREs between CAD and control in human skeletal muscle, derived from STARNET ATAC-seq data (milestone 17).
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR553091
released
Annotation file set: The dataset contains differentially expressed genes between CAD and control in human skeletal muscle, derived from STARNET RNA-seq data (milestone 17).
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR442078
released
Annotation file set: The dataset contains gene expression levels in human skeletal muscle, derived from STARNET RNA-seq data (milestone 17).
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR215161
released
Annotation file set: The dataset contains cCRE–target gene links in human skeletal muscle, predicted from STARNET ATAC-seq data with detailed annotation (milestone 17).
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR171881
released
Annotation file set: The dataset contains candidate cis-regulatory elements (cCREs) in human skeletal muscle, derived from STARNET ATAC-seq data (milestone 17).
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR443SJJ
released
Annotation file set: This file contains fine-mapping results for cis-eQTLs, identifying likely causal variants from STARNET bulk RNA-seq milestone 16 in skeletal muscle
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR820CRJ
released
Annotation file set: This file includes eQTLs that regulate gene expression from distant locations from STARNET bulk RNA-seq milestone 16 in skeletal muscle
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR906CZN
released
Annotation file set: This file contains eQTLs that regulate nearby gene expression from STARNET bulk RNA-seq milestone 16 in skeletal muscle
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR489AMO
released
Annotation file set: Tissue-specific differentially expressed genes for CAD case/control status from STARNET bulk RNA seq data for skeletal muscle (FDR=10%)
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR823VFE
released
Annotation file set: Tissue-specific gene expression from STARNET bulk RNA seq data for skeletal muscle
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR712UEE
released
Annotation file set: Tissue-specific differentially expressed genes for CAD case/control status from STARNET bulk RNA seq data for skeletal muscle (FDR=10%)
Lab: AMP-T2D consortium
Project: AMP
FileSet
TSTSR344424
released
Annotation file set: ChromHMM 13-state model for skeletal muscle
Lab: Stephen Parker, UMich
Project: AMP