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Schema
Citing CMDGA
Clear Filters
Annotation type
1
chromatin state
Annotation Category
1
cis-regulatory elements
Annotation type Category
1
ChIP-seq
Available data
1
bed bed3+
tsv
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
tissue
Biosample term
87
heart
85
stomach
74
kidney
72
brain
67
lung
67
muscle of arm
63
small intestine
61
adrenal gland
60
placenta
58
muscle of leg
56
large intestine
54
muscle of back
52
left lung
48
thymus
47
liver
45
right lung
42
right kidney
40
renal cortex interstitium
40
renal pelvis
38
retina
36
left kidney
33
heart left ventricle
33
islet of Langerhans
33
spleen
31
spinal cord
29
adipose tissue
23
sigmoid colon
22
pancreas
20
ovary
20
pigmented layer of retina
20
psoas muscle
19
thyroid gland
19
tibial nerve
19
transverse colon
18
body of pancreas
18
gastrocnemius medialis
18
heart right ventricle
17
caudate nucleus
17
muscle of trunk
17
testis
16
chorionic villus
16
coronary artery
16
layer of hippocampus
16
upper lobe of left lung
15
endocrine pancreas
15
skeletal muscle tissue
14
Peyer's patch
14
prostate gland
14
tibial artery
13
right atrium auricular region
13
substantia nigra
13
temporal lobe
12
aorta
12
left renal cortex interstitium
12
left renal pelvis
12
omental fat pad
12
right renal pelvis
11
ascending aorta
11
breast epithelium
11
esophagus muscularis mucosa
11
esophagus squamous epithelium
11
left cardiac atrium
11
right renal cortex interstitium
11
subcutaneous adipose tissue
11
thoracic aorta
11
trophoblast
10
angular gyrus
10
cerebellum
10
chorion membrane
10
colonic mucosa
10
esophagus
10
frontal cortex
10
lower leg skin
10
putamen
9
cingulate gyrus
9
duodenal mucosa
9
eye
9
mucosa of rectum
9
parathyroid adenoma
9
stomach smooth muscle
9
tongue
9
vagina
8
globus pallidus
8
limb
8
midbrain
8
muscle layer of colon
8
muscle layer of duodenum
8
uterus
7
Ammon's horn
7
gastroesophageal sphincter
7
occipital lobe
7
right cardiac atrium
7
superior temporal gyrus
6
Brodmann (1909) area 46
6
medulla oblongata
6
middle frontal gyrus
6
pons
6
skin of body
6
subcutaneous abdominal adipose tissue
6
umbilical cord
5
cartilage tissue
5
cerebellar cortex
5
germinal matrix
4
amnion
4
cortex of kidney
4
embryonic facial prominence
4
femur
4
inferior parietal cortex
4
mucosa of stomach
4
rectum smooth muscle tissue
4
right lobe of liver
3
arm bone
3
germinal center
3
leg bone
3
prefrontal cortex
3
suprapubic skin
2
hindlimb muscle
2
muscle of leg
2
amygdala
2
blood
2
breast carcinoma
2
chorion
2
dorsolateral prefrontal cortex
2
endometrium cancer
2
first pancreatic bud
2
forelimb muscle
2
hypothalamus
2
kidney epithelium
2
mammary gland
2
middle frontal area 46
2
nucleus accumbens
2
pancreatic ductal cell
2
pancreatic stellate cell
2
pituitary gland
2
placental basal plate
2
respiratory system smooth muscle
2
skin of forearm
2
skin of prepuce of penis
2
tissue
1
left kidney
1
omental fat pad
1
Brodmann (1909) area 9
1
Crypt of Lieberkuhn
1
Pancreatic islets
1
Schwann cell
1
abdominal aorta artery
1
anterior cingulate cortex
1
anterior parahippocampal gyrus
1
arcuate nucleus of hypothalamus
1
bed nucleus of stria terminalis
1
beige adipocyte
1
breast
1
caput epididymis
1
cardiac ventricle
1
cardiogenic mesoderm
1
cerebellar hemisphere
1
cerebellum (Hemisphere)
1
cerebrospinal fluid
1
circle of Willis
1
claustrum of brain
1
colon
1
colon sigmoid
1
corneal epithelium
1
cortex
1
crypt of Lieberkuhn
1
dentate nucleus
1
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
dorsal lateral geniculate nucleus
1
dura mater
1
endometrium
1
endothelial cell
1
entorhinal cortex
1
epididymis
1
esophagus mucosa
1
fallopian tube
1
fetal heart
1
frontal pole
1
gastric (mucosa of stomach)
1
glomerular epithelium
1
gyrus rectus
1
hindlimb muscle
1
intestinal epithelium
1
left leg bone
1
locus ceruleus
1
medial dorsal nucleus of thalamus
1
medulloblastoma
1
mid-frontal lobe
1
minor salivary gland
1
morula
1
myelencephalon
1
nephron tubule
1
nucleus of ventral thalamus
1
pancreatic A cell
1
pancreatic D cell
1
pancreatic PP cell
1
pancreatic acinar cell
1
pancreatic adenocarcinoma
Organ
1
musculature of body
Date released
1
August, 2017
Software used
1
chromhmm
Lab
1
Stephen Parker, UMich
Project
1
AMP
RFA
1
AMP
files.file_type!
tsv
organ_slims!
urinary bladder
Showing 1 of 1 results
table-tab-icon
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Download
FileSet
TSTSR344424
released
Annotation file set
: ChromHMM 13-state model for skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP