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Schema
Clear Filters
Annotation type
2
differential activity
2
eQTL
1
Fine-mapped variants
1
chromatin state
1
gene expression
Annotation Category
3
Gene expression levels
2
Genetic variant effects
2
cis-regulatory elements
Annotation type Category
6
RNA-seq
1
ChIP-seq
Available data
6
tsv
1
bed bed3+
File set status
7
released
Genome assembly (visualization)
1
hg19
Organism
7
Homo sapiens
Biosample type
7
tissue
Biosample term
67
muscle of arm
58
muscle of leg
54
muscle of back
20
psoas muscle
18
gastrocnemius medialis
17
muscle of trunk
16
skeletal muscle tissue
13
skeletal muscle satellite cell
11
esophagus muscularis mucosa
9
skeletal muscle fiber
9
stomach smooth muscle
7
LHCN-M2
7
gastroesophageal sphincter
7
skeletal muscle
7
type I muscle cell
7
type II muscle cell
6
skeletal muscle cell
5
A673
5
SJCRH30
5
gastrocnemius medialis(Muscle - Skeletal)
5
left ventricle myocardium
5
myotube
4
rectum smooth muscle tissue
2
hindlimb muscle
2
muscle of leg
2
cardiac muscle myoblast
2
forelimb muscle
2
respiratory system smooth muscle
2
somatic muscle myotube
1
aortic smooth muscle cell
1
esophagus - gastroesophageal junction
1
esophagus - muscularis
1
hindlimb muscle
1
rectal smooth muscle tissue
1
smooth muscle tissue
Organ
7
musculature of body
Life stage
6
adult
Date released
5
March, 2025
1
August, 2017
1
February, 2024
Software used
3
deseq2
3
qTLtools
1
chromhmm
Lab
6
AMP-T2D consortium
1
Stephen Parker, UMich
Project
7
AMP
Collection Tags
6
STARNET
RFA
7
AMP
Showing 7 of 7 results
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Download
FileSet
DSR443SJJ
released
Annotation file set
: This file contains fine-mapping results for cis-eQTLs, identifying likely causal variants from STARNET bulk RNA-seq milestone 16 in skeletal muscle
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR820CRJ
released
Annotation file set
: This file includes eQTLs that regulate gene expression from distant locations from STARNET bulk RNA-seq milestone 16 in skeletal muscle
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR906CZN
released
Annotation file set
: This file contains eQTLs that regulate nearby gene expression from STARNET bulk RNA-seq milestone 16 in skeletal muscle
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR489AMO
released
Annotation file set
: Tissue-specific differentially expressed genes for CAD case/control status from STARNET bulk RNA seq data for skeletal muscle (FDR=10%)
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR823VFE
released
Annotation file set
: Tissue-specific gene expression from STARNET bulk RNA seq data for skeletal muscle
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR712UEE
released
Annotation file set
: Tissue-specific differentially expressed genes for CAD case/control status from STARNET bulk RNA seq data for skeletal muscle (FDR=10%)
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
TSTSR344424
released
Annotation file set
: ChromHMM 13-state model for skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP