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Schema
Clear Filters
Annotation type
2
differential activity
2
eQTL
1
Fine-mapped variants
1
chromatin state
1
gene expression
Annotation Category
3
Gene expression levels
2
Genetic variant effects
2
cis-regulatory elements
Annotation type Category
6
RNA-seq
1
ChIP-seq
Available data
6
tsv
1
bed bed3+
File set status
7
released
Genome assembly (visualization)
1
hg19
Organism
7
Homo sapiens
Biosample type
7
tissue
Biosample term
2636
whole blood
83
heart
82
stomach
68
kidney
68
lung
67
brain
66
muscle of arm
64
HeLa-S3
62
small intestine
61
adrenal gland
59
A549
56
muscle of leg
56
placenta
54
common myeloid progenitor, CD34-positive
54
large intestine
54
muscle of back
52
left lung
51
H1-hESC
47
liver
45
thymus
44
right lung
42
right kidney
40
B cell
40
hematopoietic multipotent progenitor cell
39
renal cortex interstitium
38
K562
38
islet of Langerhans
38
renal pelvis
36
left kidney
32
CD4-positive, alpha-beta memory T cell
31
CD14-positive monocyte
31
spinal cord
30
heart left ventricle
30
spleen
28
adipose tissue
26
monocyte
25
endothelial cell
24
body of pancreas
24
hepatocyte
24
macrophage
23
regulatory T cell
23
subcutaneous adipose tissue
22
CD8-positive, alpha-beta memory T cell
22
T-helper 1 cell
22
epithelial cell of proximal tubule
22
natural killer cell
22
sigmoid colon
22
tibial nerve
21
MCF-7
21
T-helper 17 cell
21
neural progenitor cell
21
trophoblast cell
20
adipocyte
19
HFFc6
19
caudate nucleus
19
foreskin keratinocyte
19
glomerular endothelial cell
19
mononuclear cell
19
ovary
19
psoas muscle
18
CD8-positive, alpha-beta T cell
17
T-helper 2 cell
17
coronary artery
17
endothelial cell of umbilical vein
17
heart right ventricle
17
muscle of trunk
17
smooth muscle cell
17
substantia nigra
17
thyroid gland
17
transverse colon
16
H9
16
T cell
16
chorionic villus
16
fibroblast of lung
16
gastrocnemius medialis
16
induced pluripotent stem cell
16
omental fat pad
16
right atrium auricular region
15
fibroblast
15
retina
15
skeletal muscle tissue
15
tibial artery
14
CD4-positive, alpha-beta T cell
14
ascending aorta
14
endocrine pancreas
14
mesenchymal stem cell
14
pancreas
14
testis
13
EndoC_BH1
13
GM12878
13
Peyer's patch
13
aorta
13
cerebellum
13
foreskin fibroblast
13
frontal cortex
13
layer of hippocampus
13
neurosphere
13
neutrophil
13
pericyte cell
12
fibroblast of dermis
12
left renal cortex interstitium
12
pancreatic ductal cell
12
skeletal muscle myoblast
12
temporal lobe
12
upper lobe of left lung
11
mammary gland epithelial cell
11
putamen
10
Ammon's horn
10
SK-N-SH
10
cardiac muscle cell
10
fibroblast of cardiac tissue
10
keratinocyte
10
left cardiac atrium
10
right renal cortex interstitium
9
HepG2
9
breast epithelium
9
cardiomyocytes
9
colonic mucosa
9
esophagus
9
esophagus squamous epithelium
9
left renal pelvis
9
naive thymus-derived CD4-positive, alpha-beta T cell
9
pancreatic beta cell
9
pancreatic delta cell
9
parathyroid adenoma
9
right renal pelvis
9
thoracic aorta
9
vagina
8
22Rv1
8
bronchial epithelial cell
8
cingulate gyrus
8
dermis blood vessel endothelial cell
8
duodenal mucosa
8
epithelial cell of prostate
8
esophagus muscularis mucosa
8
immortal human breast epithelial cell line cell
8
lower leg skin
8
lymphocyte
8
myoepithelial cell of mammary gland
8
naive T cell
8
pancreatic acinar cell
8
pituitary stalk
8
progenitor cell of endocrine pancreas
8
prostate gland
8
skeletal muscle satellite cell
8
tongue
7
LNCaP clone FGC
7
T47D
7
WI38
7
angular gyrus
7
cardiomyocytes (cardiac muscle cell)
7
embryonic stem cell
7
endometrium adenocarcinoma
7
extended pluripotent stem (EPS) cells
7
eye
7
glomerular visceral epithelial cell
7
kidney tubule cell
7
limb
7
pancreatic alpha cell
7
right lobe of liver
7
stomach smooth muscle
7
trophoblast
6
Brodmann (1909) area 46
6
HCT116
6
HEK293
6
IMR-90
6
NAMALWA cell
6
SK-N-DZ
6
anterior cingulate cortex
6
aorta wall
6
cardiac precursors (cardiac muscle cell)
6
chorion membrane
6
fibroblast of breast
6
hepatic stellate cell
6
kidney glomerular epithelial cell
6
lymphoblastoid cell line
6
mucosa of rectum
6
naive thymus-derived CD8-positive, alpha-beta T cell
6
osteoblast
6
skeletal muscle
6
uterus
5
A673
5
Adaptive / Maladaptive / Repairing Fibroblast
5
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
5
Afferent / Efferent Arteriole Endothelial Cell
5
B Cell
5
C1 segment of cervical spinal cord
5
CD14-positive, CD16-negative classical monocyte
5
CD4-positive helper T cell
5
Classical Dendritic Cell
5
Connecting Tubule Cell
5
Connecting Tubule Intercalated Cell Type A
5
Connecting Tubule Principal Cell
5
Cortical Thick Ascending Limb Cell
5
Cycling Endothelial Cell
5
Cycling Epithelial Cell
5
Cycling T Cell
5
Cytotoxic T Cell
Organ
7
musculature of body
Life stage
6
adult
Date released
5
March, 2025
1
August, 2017
1
February, 2024
Software used
3
deseq2
3
qTLtools
1
chromhmm
Lab
6
AMP-T2D consortium
1
Stephen Parker, UMich
Project
7
AMP
Collection Tags
6
STARNET
RFA
7
AMP
software_used.software.name!
macs
Showing 7 of 7 results
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Download
FileSet
DSR443SJJ
released
Annotation file set
: This file contains fine-mapping results for cis-eQTLs, identifying likely causal variants from STARNET bulk RNA-seq milestone 16 in skeletal muscle
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR820CRJ
released
Annotation file set
: This file includes eQTLs that regulate gene expression from distant locations from STARNET bulk RNA-seq milestone 16 in skeletal muscle
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR906CZN
released
Annotation file set
: This file contains eQTLs that regulate nearby gene expression from STARNET bulk RNA-seq milestone 16 in skeletal muscle
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR489AMO
released
Annotation file set
: Tissue-specific differentially expressed genes for CAD case/control status from STARNET bulk RNA seq data for skeletal muscle (FDR=10%)
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR823VFE
released
Annotation file set
: Tissue-specific gene expression from STARNET bulk RNA seq data for skeletal muscle
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR712UEE
released
Annotation file set
: Tissue-specific differentially expressed genes for CAD case/control status from STARNET bulk RNA seq data for skeletal muscle (FDR=10%)
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
TSTSR344424
released
Annotation file set
: ChromHMM 13-state model for skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP