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Assay category
1
DNA accessibility
1
DNA binding
Assay
1
ChIP-seq
1
DNase-seq
Project
2
AMP
RFA
2
AMP
Experiment status
2
released
Genome assembly (visualization)
2
hg19
1
GRCh38
Organism
2
Homo sapiens
Target of assay
1
histone
1
histone modification
1
narrow histone mark
Biosample type
2
primary cell
Life stage
2
unknown
Available data
2
bam
2
bed narrowPeak
2
bigBed narrowPeak
2
bigWig
2
fastq
1
bed broadPeak
1
bigBed broadPeak
Platform
11
Illumina Genome Analyzer IIx
8
Illumina Genome Analyzer IIe
2
Illumina HiSeq 2000
1
Illumina Genome Analyzer
1
Illumina Genome Analyzer II
Run type
2
paired-ended
2
single-ended
Read length (nt)
2
36
1
76
1
101
Library made from
2
DNA
Date released
2
August, 2017
Lab
2
AMP-T2D consortium
Replication type
2
isogenic
Audit category:
1
inconsistent assembly
1
inconsistent control read length
1
inconsistent control run_type
Showing 2 of 2 results
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Experiment
TSTSR251267
released
DNase-seq
of skeletal muscle myoblast
Homo sapiens
skeletal muscle myoblast
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR410352
released
Audit warning
3
ChIP-seq
of skeletal muscle myoblast
Homo sapiens
skeletal muscle myoblast male (22 years)
Target:
H3K4me3
Lab:
AMP-T2D consortium
Project:
AMP