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Citing CMDGA
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Annotation type
1
chromatin state
1
gene expression
Annotation Category
1
Gene expression levels
1
cis-regulatory elements
Annotation type Category
1
ChIP-seq
1
RNA-seq
Available data
bed bed3+
1
bed bed9
1
tsv
File set status
2
released
Genome assembly (visualization)
1
GRCh38
1
hg19
Organism
2
Homo sapiens
Biosample type
2
in vitro differentiated cells
1
primary cell
Biosample term
12
neural progenitor cell
11
cardiomyocytes
11
hematopoietic multipotent progenitor cell
9
extended pluripotent stem (EPS) cells
9
induced pluripotent stem cell
9
progenitor cell of endocrine pancreas
4
cardiac precursors (cardiac muscle cell)
4
cardiomyocytes (cardiac muscle cell)
3
adipocyte
3
hepatocyte(AFP)
3
pancreatic ductal cell
2
adipose-derived stem cell
2
differentiating adipose-derived stem cell
2
endodermal cell
2
mesenchymal stem cell
2
muscle cell
2
smooth muscle cell
1
Progenitor cell of Hypothalamus (neural progenitor cell)
1
bipolar neuron
1
cardiac fibroblast
1
cardiac mesoderm primordium
1
cardiac muscle cell
1
cardiac muscle cell (pacemaker cell)
1
ectodermal cell
1
embryonic stem cell
1
endothelial cell
1
excitatory neuron
1
hepatocyte
1
hippocampal neuron
1
intermediate cardiomyocytes
1
intermediate endothelial cell
1
intermediate smooth muscle cell
1
islet precursor cell
1
lower motor neuron
1
mesendoderm
1
mesodermal cell
1
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
myocyte
1
neural cell
1
neuron
1
neuron cell of Hypothalamus (neuron)
1
olfactory neurosphere cell line
1
stem cell
1
trophoblast cell
Life stage
1
embryonic
Date released
1
May, 2021
1
September, 2022
Software used
1
chromhmm
1
r
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
files.file_type!
bed bed3+
bigBed bed9
Showing 2 of 2 results
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Download
FileSet
DSR708TJP
released
Annotation file set
: Chromatin states for BSS01612 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR656HJI
released
Annotation file set
: Gene expression annotation of smooth muscle cell_SMC ISL1-SMMHC+ on day 10 from embryonic stem cell
Lab:
AMP-T2D consortium
Project:
AMP