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Schema
Citing CMDGA
Clear Filters
Annotation type
2
accessible chromatin
2
target gene predictions
Annotation Category
2
Target gene links
2
cis-regulatory elements
Annotation type Category
2
ATAC-seq
2
snATAC-seq
Available data
4
bed bed3+
2
bigWig
File set status
4
released
Genome assembly (visualization)
4
GRCh38
4
hg19
Organism
4
Homo sapiens
Biosample type
4
primary cell
Biosample term
41
K562
34
spinal cord
16
GM12878
14
Peyer's patch
11
esophagus muscularis mucosa
11
esophagus squamous epithelium
10
esophagus
8
GM06990
8
GM19240
8
HAP-1
8
HL-60
8
NAMALWA cell
8
OCI-LY7
7
CMK
7
GM12875
7
GM19238
7
GM19239
7
RPMI8226
6
GM12891
6
GM12892
6
GM18507
6
KBM-7
6
epithelial cell of esophagus
6
peripheral blood mononuclear cell
5
C1 segment of cervical spinal cord
5
NB4
4
GM12873
4
GM18505
4
GM19099
4
GM19193
4
astrocyte of the spinal cord
4
smooth muscle cell of the esophagus
3
GM10847
3
GM12872
3
GM18526
3
GM18951
3
germinal center
3
peripheral blood stem cell
2
NAMALWA
2
blood
1
GM12874
1
Karpas-422
1
esophagus - mucosa
1
esophagus - muscularis
1
esophagus mucosa
1
small intestine - terminal Ileum
1
whole blood
Organ
4
esophagus
0
blood
0
lymphoid tissue
0
spinal cord
Date released
4
November, 2021
Software used
2
abc
2
macs
Lab
4
Bing Ren, UCSD
Project
4
ENCODE
RFA
4
ENCODE3
Showing 4 of 4 results
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Download
FileSet
DSR738CKV
released
Annotation file set
: Target gene predictions of Smooth Muscle (Esophageal Muscularis) 2 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR513MXE
released
Annotation file set
: Target gene predictions of Smooth Muscle (Esophageal Muscularis) 1 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR279PTE
released
Annotation file set
: Accessible chromatin annotation of Smooth Muscle (Esophageal Muscularis) 2 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR530GKX
released
Annotation file set
: Accessible chromatin annotation of Smooth Muscle (Esophageal Muscularis) 1 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE