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Schema
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Annotation type
2
candidate regulatory elements
2
target gene predictions
1
chromatin state
Annotation Category
3
cis-regulatory elements
2
Target gene links
Annotation type Category
4
ChIP-seq
4
DNase-seq
Available data
4
bed bed3+
1
bed bed9
File set status
5
released
Genome assembly (visualization)
4
hg19
2
GRCh38
Organism
5
Homo sapiens
Biosample type
5
primary cell
Biosample term
9
MG63
8
SJSA1
6
OCI-LY1
5
HS-27A
5
HS-5
5
L1-S8
5
OCI-LY3
5
femur
5
stromal cell of bone marrow
4
KMS-11
4
L1-S8R
4
NCI-H929
4
U2OS
4
bone tissue
4
megakaryocyte
3
arm bone
3
leg bone
3
mononuclear cell of bone marrow
2
A673
2
SJCRH30
2
articular chondrocyte
1
CD34-negative, CD41-positive, CD42-positive megakaryocyte cell
1
bone cell
1
bone marrow cell
1
chondrocyte
1
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
osteoblast
1
osteocyte
1
proximal epiphysis
1
proximal epiphysis of femur
1
proximal epiphysis of humerus
1
proximal epiphysis of tibia
Organ
5
bone element
4
bone marrow
4
connective tissue
Life stage
4
unknown
Date released
3
September, 2022
1
February, 2021
1
July, 2026
Software used
2
r
1
chromhmm
1
encode-ccres
Lab
5
AMP-T2D consortium
Project
5
AMP
Collection Tags
3
EpiMap
1
ENCODE
1
ENCODE-rE2G
RFA
5
AMP
Showing 5 of 5 results
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Download
FileSet
DSR050283
released
Annotation file set
: Target gene predictions for stromal cell of bone marrow (CL:0010001) derived from ENCODE-rE2G (ENCSR457ADT).
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR748MDW
released
Annotation file set
: Candidate regulatory elements for BSS01661 stromal cell of bone marrow from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR928GVV
released
Annotation file set
: Target gene predictions for BSS01661 stromal cell of bone marrow from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR315JBI
released
Annotation file set
: Chromatin states for BSS01661 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR880WUR
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE stromal cell of bone marrow
Lab:
AMP-T2D consortium
Project:
AMP