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Schema
Citing CMDGA
Clear Filters
Annotation type
3
eQTL
1
chromatin state
Annotation Category
3
Genetic variant effects
1
cis-regulatory elements
Annotation type Category
3
RNA-seq
1
ChIP-seq
1
RNA microarray
Available data
2
bed bed3+
File set status
4
released
Genome assembly (visualization)
3
hg19
1
hg18
Organism
4
Homo sapiens
Biosample type
4
tissue
Biosample term
31
neural progenitor cell
10
H1-hESC
10
islet of Langerhans
8
kidney
8
liver
5
endothelial cell
4
adipocyte
4
cartilage tissue
4
subcutaneous adipose tissue
3
HepG2
3
fibroblast of lung
3
hepatocyte
2
CD4-positive helper T cell
2
ESC derived cell line
2
GM12878
2
K562
2
MIN6
2
adipose tissue
2
blood
2
endothelial cell of umbilical vein
2
epithelial cell of proximal tubule
2
erythroblast
2
foreskin fibroblast
2
kidney distal convoluted tubule epithelial cell
2
mammary epithelial cell
2
renal principal cell
2
skeletal muscle myoblast
1
A549
1
AG04449 cell
1
AG04450 cell
1
AG09309 cell
1
AG09319 cell
1
AG10803 cell
1
B-1 B cell
1
B-2 B cell
1
BE(2)-C
1
BJ cell
1
CD34-PB
1
CD8-positive, alpha-beta T cell
1
Caco-2 cell
1
DND-41 cell
1
ECC-1
1
GM06990
1
GM08714
1
GM10847
1
GM12801
1
GM12864
1
GM12865
1
GM12872
1
GM12873
1
GM12874
1
GM12875
1
GM12891
1
GM12892
1
GM15510
1
GM18505
1
GM18526
1
GM18951
1
GM19099
1
GM19193
1
GM19238
1
GM19239
1
GM19240
1
HAC cell
1
HBMEC cell
1
HCT-116 cell
1
HEK293
1
HEK293-T-REx cell
1
HFF-Myc
1
HGPS cell
1
HL-60
1
HeLa-S3
1
IMR-90
1
MCF-7
1
MCF10A-Er-Src cell
1
NB4
1
NHEK
1
NT2-D1 cell
1
Normal Human Astrocytes
1
PANC-1 cell
1
PFSK-1 cell
1
Raji cell
1
SAEC
1
SH-SY5Y cell
1
SK-N-MC
1
SK-N-SH
1
SK-N-SH_RA
1
T-47D cell
1
T-helper 17 cell
1
U-87 MG
1
U2OS
1
WERI-Rb-1
1
WI-38 cell
1
alternatively activated macrophage
1
aorta
1
aortic adventitial fibroblast
1
aortic valve
1
cardiac fibroblast
1
cardiac muscle cell
1
caudate nucleus
1
cerebrospinal fluid
1
choroid plexus epithelial cell
1
cingulate gyrus
1
colonic mucosa
1
dendritic cell
1
duodenal mucosa
1
effector CD8-positive, alpha-beta T cell
1
esophageal epithelial cell
1
fibroblast
1
fibroblast of dermis
1
fibroblast of mammary gland
1
fibroblast of pulmonary artery
1
fibroblast of villous mesenchyme
1
glioblastoma cell
1
glomerular endothelial cell
1
glomerular visceral epithelial cell
1
heart
1
heart right ventricle
1
inflammatory macrophage
1
keratinocyte
1
kidney connecting tubule epithelial cell
1
kidney granular cell
1
kidney inner medulla collecting duct epithelial cell
1
kidney interstitial cell
1
kidney interstitial fibroblast
1
kidney loop of Henle ascending limb epithelial cell
1
kidney loop of Henle epithelial cell
1
kidney loop of Henle thin descending limb epithelial cell
1
kidney proximal convoluted tubule epithelial cell
1
kidney proximal convoluted tubule epithelial cell & kidney proximal straight tubule epithelial cell
1
kidney proximal straight tubule epithelial cell
1
layer of hippocampus
1
left cardiac atrium
1
lymphocyte(CL:0000542) and natural killer cell(CL:0000623)
1
macrophage
1
macrophage(CL:0000235) and neutrophil(CL:0000775)
1
mesenchymal stem cell
1
mid-frontal lobe
1
mitral valve
1
mucosa of rectum
1
myotube
1
naive t cell
1
natural killer cell
1
omental fat pad
1
osteoblast
1
pancreas
1
progenitor cell
1
proximal tubule cells with injury markers
1
pulmonary valve
1
rectum smooth muscle tissue
1
renal alpha-intercalated cell
1
renal beta-intercalated cell
1
renal epithelial cell
1
renal intercalated cell
1
retinal pigment epithelial cell
1
right cardiac atrium
1
skeletal muscle
1
skeletal muscle tissue
1
smooth muscle cell
1
spinal cord
1
stomach smooth muscle
1
subcutaneous abdominal adipose tissue
1
substantia nigra
1
synovial joint
1
temporal lobe
1
tricuspid valve
1
type I muscle cell
1
type II muscle cell
Organ
4
adipose tissue
4
connective tissue
Life stage
3
adult
Date released
6
February, 2021
3
August, 2021
3
March, 2020
2
February, 2020
1
August, 2017
1
February, 2024
1
January, 2018
1
January, 2020
1
January, 2022
1
May, 2020
1
September, 2018
0
October, 2022
Software used
1
chromhmm
1
epacts
1
fast-lmm
1
mach2qtl
1
matrix-eQTL
Lab
3
AMP-T2D consortium
1
Stephen Parker, UMich
Project
4
AMP
RFA
4
AMP
Showing 4 of 4 results
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Download
FileSet
DSR513VNX
released
Annotation file set
: eQTL annotation of subcutaneous adipose tissue from PMID:29632379
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR397GGI
released
Annotation file set
: eQTLS in different tissues: subcutaneous fat (609 samples)
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR669QFK
released
Annotation file set
: eQTLs from RNA microarray samples from 770 males who are part of the METSIM study of subcutaneous adipose tissue for GSE70353
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
TSTSR804392
released
Annotation file set
: ChromHMM 13-state model for Adipose
Lab:
Stephen Parker, UMich
Project:
AMP