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Schema
Citing CMDGA
Clear Filters
Annotation type
1
accessible chromatin
1
chromatin state
1
eQTL
1
variant allelic effects
Annotation Category
2
Genetic variant effects
2
cis-regulatory elements
Annotation type Category
2
ATAC-seq
1
ChIP-seq
1
RNA-seq
Available data
3
bed bed3+
1
bigWig
File set status
4
released
Genome assembly (visualization)
3
hg19
2
GRCh38
Organism
4
Homo sapiens
Biosample type
4
tissue
Biosample term
30
fibroblast
22
adipocyte
22
pericyte cell
19
foreskin fibroblast
15
osteoblast
14
fibroblast of cardiac tissue
14
mesenchymal stem cell
12
skin fibroblast
11
fibroblast of lung
9
pancreatic stellate cell
8
adipose tissue
8
fibroblast of dermis
8
fibroblast of mammary gland
8
fibroblast of pulmonary artery
8
fibroblast of villous mesenchyme
7
chondrocyte
5
fibroblast of peridontal ligament
5
fibroblast of the aortic adventitia
5
fibroblast of the conjunctiva
5
hepatic stellate cell
4
brain pericyte
4
cardiac fibroblast
4
fibroblast of gingiva
4
mesangial cell
4
preadipocyte
4
stromal cell of bone marrow
4
subcutaneous adipose tissue
3
cardiac fibroblast
3
GM23248
3
amnion mesenchymal stem cell
3
amniotic stem cell
3
pancreatic quiescent stellate cell
3
pulmonary interstitial fibroblast
2
adipose tissue derived mesenchymal stem cell
2
columnar chondrocyte
2
extracellular matrix secreting cell
2
fat cell
2
luteal cell
2
stromal cell
1
omental fat pad
1
Adipose SGBS cell line (adipocyte)
1
Human Mesenchymal Cell derived Adipocytes
1
Human Mesenchymal Cell derived Osteoblasts
1
Preadipose SGBS cell line (adipocyte)
1
SGBS preadipocytes
1
adipose-derived mesenchymal stem cell
1
adult endothelial progenitor cell
1
beige adipocyte
1
cardiac atrium fibroblast
1
cartilage tissue
1
dedifferentiated amniotic fluid mesenchymal stem cell
1
embryonic fibroblast
1
fibroblast of arm
1
fibroblast of skin of abdomen
1
pericardium fibroblast
1
subcutaneous abdominal adipose tissue
1
visceral abdominal adipose tissue
1
white adipose cell
1
white adipose tissue
Organ
4
adipose tissue
4
connective tissue
Life stage
adult
Date released
1
August, 2017
1
January, 2020
1
January, 2022
1
May, 2020
Software used
1
chromhmm
1
deltasvm
1
macs
1
qTLtools
Lab
3
AMP-T2D consortium
1
Stephen Parker, UMich
Project
4
AMP
RFA
4
AMP
relevant_life_stage!
adult
Showing 4 of 4 results
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Download
FileSet
DSR943WPJ
released
Annotation file set
: adipose subcutaneous eQTL of studay GTEx from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR802UOO
released
Annotation file set
: Genetic variants with deltaSVM predictions in adipose white tissue ATAC-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR687BVG
released
Annotation file set
: Accessible chromatin annotation of adipose white tissue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
TSTSR804392
released
Annotation file set
: ChromHMM 13-state model for Adipose
Lab:
Stephen Parker, UMich
Project:
AMP