Search – Common Metabolic Diseases Genome Atlas

Showing 25 of 25 results

FileSet
DSR697QDJ
released
Annotation file set: This file contains fine-mapping results for cis-eQTLs, identifying likely causal variants from STARNET bulk RNA-seq milestone 16 in subcutaneous adipose tissue
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR515IFG
released
Annotation file set: This file includes eQTLs that regulate gene expression from distant locations from STARNET bulk RNA-seq milestone 16 in subcutaneous adipose tissue
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR460JSW
released
Annotation file set: This file contains eQTLs that regulate nearby gene expression from STARNET bulk RNA-seq milestone 16 in subcutaneous adipose tissue
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR895XAU
released
Annotation file set: Tissue-specific differentially expressed genes for CAD case/control status from STARNET bulk RNA seq data for subcutaneous adipose tissue (FDR=10%)
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR225KLD
released
Annotation file set: Tissue-specific gene expression from STARNET bulk RNA seq data for subcutaneous adipose tissue
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR639EWK
released
Annotation file set: Tissue-specific differentially expressed genes for CAD case/control status from STARNET bulk RNA seq data for subcutaneous adipose tissue (FDR=10%)
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR943WPJ
released
Annotation file set: adipose subcutaneous eQTL of studay GTEx from eQTL Catalogue
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR513VNX
released
Annotation file set: eQTL annotation of subcutaneous adipose tissue from PMID:29632379
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR397GGI
released
Annotation file set: eQTLS in different tissues: subcutaneous fat (609 samples)
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR669QFK
released
Annotation file set: eQTLs from RNA microarray samples from 770 males who are part of the METSIM study of subcutaneous adipose tissue for GSE70353
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR306BCP
released
Annotation file set: Gene expression annotation of subcutaneous adipose tissue for GSE135134
Lab: Karen Mohlke, UNC
Project: AMP
FileSet
DSR965YTD
released
Annotation file set: METSIM RNAseq local eQTLs – all results, including non-significant cis-eQTLs
Lab: Karen Mohlke, UNC
Project: AMP
FileSet
DSR673AWN
released
Annotation file set: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE subcutaneous adipose tissue
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR178YJU
released
Annotation file set: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE subcutaneous adipose tissue
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR919NRD
released
Annotation file set: Gene expression TPM of developmental origins define epigenomic differences between subcutaneous and visceral adipocytes [RNA_seq_Whole]
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR956BKR
released
Annotation file set: Gene expression TPM of developmental origins define epigenomic differences between subcutaneous and visceral adipocytes of GSE110821 [RNA-Seq]
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR802UOO
released
Annotation file set: Genetic variants with deltaSVM predictions in adipose white tissue ATAC-seq
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR329VXM
released
Annotation file set: Fine-mapping results from DAPG of subcutaneous adipose tissue for GTEx V8
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR382TAD
released
Annotation file set: Fine-mapping results from CAVIAR of subcutaneous adipose tissue for GTEx V8
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR337DSV
released
Annotation file set: Fine-mapping results from CaVEMaN of subcutaneous adipose tissue for GTEx V8
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR818ESF
released
Annotation file set: Gene expression levels of adipose subcutaneous from RNA-seq (ENCODE)
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR687BVG
released
Annotation file set: Accessible chromatin annotation of adipose white tissue
Lab: AMP-T2D consortium
Project: AMP
FileSet
TSTSR978YHK
released
Annotation file set: ATAC-seq sites in subcutaneous adipose tissue for 1 sample from ENCODE
Lab: AMP-T2D consortium
Project: AMP
FileSet
TSTSR545375
released
Annotation file set: GTEx Analysis V8 (dbGaP Accession phs000424.v8.p2) and GTEx Analysis V7 (dbGaP Accession phs000424.v7.p2) TPM gene expression values from GTEx for key tissues - adipose subcutaneous
Lab: AMP-T2D consortium
Project: AMP
FileSet
TSTSR804392
released
Annotation file set: ChromHMM 13-state model for Adipose
Lab: Stephen Parker, UMich
Project: AMP