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Citing CMDGA
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Annotation type
1
target gene predictions
Annotation Category
1
Target gene links
Annotation type Category
1
Capture-C
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
stem cell
Biosample term
94
monocyte
65
stomach
63
heart
61
HeLa-S3
51
brain
50
lung
50
muscle of arm
49
kidney
47
small intestine
46
adrenal gland
45
H1-hESC
45
placenta
44
A549
43
CD8-positive, alpha-beta T cell
43
large intestine
42
muscle of leg
41
common myeloid progenitor, CD34-positive
41
muscle of back
39
left lung
39
neural progenitor cell
37
thymus
35
K562
34
right lung
32
hematopoietic multipotent progenitor cell
30
liver
30
renal cortex interstitium
30
renal pelvis
30
right kidney
28
B cell
27
CD14-positive monocyte
27
left kidney
27
spinal cord
24
spleen
23
CD4-positive, alpha-beta memory T cell
21
MCF-7
20
adipocyte
20
breast cancer cell
20
heart left ventricle
19
HFFc6
19
retina
18
adipose tissue
18
foreskin keratinocyte
17
foreskin fibroblast
17
keratinocyte
17
sigmoid colon
17
trophoblast cell
16
endothelial cell
16
fibroblast
15
CD8-positive, alpha-beta memory T cell
15
GM12878
15
H9
15
HepG2
15
ovary
15
psoas muscle
14
gastrocnemius medialis
14
hepatocyte
14
mononuclear cell
14
pancreas
14
smooth muscle cell
14
transverse colon
13
body of pancreas
13
cardiac muscle cell
13
endothelial cell of umbilical vein
13
mesenchymal stem cell
13
natural killer cell
13
thyroid gland
13
upper lobe of left lung
12
T cell
12
fibroblast of lung
12
heart right ventricle
12
islet of Langerhans
12
layer of hippocampus
12
mammary epithelial cell
12
muscle of trunk
12
neuroblastoma cell
12
regulatory T cell
12
testis
12
tibial nerve
11
CD4-positive, alpha-beta T cell
11
EndoC_BH1
11
chorionic villus
11
fibroblast of cardiac tissue
11
mammary gland epithelial cell
11
osteoblast
10
Peyer's patch
10
Rhabdomyosarcoma
10
bronchial epithelial cell
10
caudate nucleus
10
embryonic stem cell
10
endocrine pancreas
10
gastric cancer cell
10
macrophage
10
neuronal stem cell
10
prostate gland
10
retinal pigment epithelial cell
10
skeletal muscle myoblast
10
skeletal muscle tissue
9
coronary artery
9
diffuse intrinsic pontine glioma
9
endothelial cell of hepatic sinusoid
9
epithelial cell of prostate
9
fibroblast of dermis
9
liposarcoma
9
lymphocyte
9
neurosphere
8
22Rv1
8
B-lymphoblastoid cell line
8
HEK293
8
IMR-90
8
T-helper 1 cell
8
breast epithelium
8
fibroblast cell line
8
pericyte cell
8
pituitary stalk
8
right renal pelvis
8
skin fibroblast
8
temporal lobe
8
trophoblast
7
CD4-positive helper T cell
7
GM06990
7
GM12864
7
GM12865
7
GM19240
7
HAP-1
7
HL-60
7
HT-29
7
Jurkat
7
aorta
7
colonic mucosa
7
esophageal adenocarcinoma
7
esophagus muscularis mucosa
7
esophagus squamous epithelium
7
left cardiac atrium
7
left renal cortex interstitium
7
left renal pelvis
7
lower leg skin
7
mesendoderm
7
neutrophil
7
substantia nigra
6
AG04449 cell
6
AG04450 cell
6
AG09309 cell
6
AG09319 cell
6
AG10803 cell
6
BE(2)-C
6
BJ cell
6
CD1c-positive myeloid dendritic cell
6
CMK
6
Caco-2 cell
6
Chondroid Chordoma
6
GM12875
6
GM19238
6
GM19239
6
GM23248
6
HUES8
6
LNCAP
6
LoVo cell
6
MG63
6
NAMALWA cell
6
SK-N-MC
6
astrocyte
6
chondrocyte
6
choroid plexus epithelial cell
6
cingulate gyrus
endometrium adenocarcinoma
6
esophagus
6
eye
6
fibroblast of pulmonary artery
6
hESC cell
6
immortal human breast epithelial cell line cell
6
naive thymus-derived CD4-positive, alpha-beta T cell
6
neuroblastoma cell line
6
omental fat pad
6
pancreatic ductal cell
6
parathyroid adenoma
6
pigmented layer of retina
6
thoracic aorta
6
tibial artery
6
tongue
5
Ammon's horn
5
CyT49
5
Daoy
5
Ewing sarcoma
5
GM08714
5
GM10248
5
GM10266
5
GM12891
5
GM12892
5
GM18507
5
H7-hESC
5
HCT-116 cell
5
HCT116
5
HUES6
5
HuH-7
5
KARPAS-422 cell
5
LHCN-M2
5
MM.1S
5
OCI-LY7
5
PC-9
5
SJSA1
Organ
1
brain
Date released
1
September, 2023
Software used
1
chicago
Lab
1
Struan F.A. Grant, CHOP
Project
1
AMP
RFA
1
AMP2
biosample_term_name!
endometrium adenocarcinoma
files.file_type!
bigWig
Showing 1 of 1 results
table-tab-icon
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Download
FileSet
DSR843RXV
released
Annotation file set
: Target gene annotation of open chromatin regions from promoter capture c of ESC (1frag and 4 frag)
Lab:
Struan F.A. Grant, CHOP
Project:
AMP