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Schema
Citing CMDGA
Clear Filters
Annotation type
1
target gene predictions
Annotation Category
1
Target gene links
Annotation type Category
1
Capture-C
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
stem cell
Biosample term
116
monocyte
66
heart
66
stomach
61
HeLa-S3
58
kidney
54
brain
51
lung
51
muscle of arm
48
CD8-positive, alpha-beta T cell
48
small intestine
47
adrenal gland
46
placenta
45
H1-hESC
44
A549
43
large intestine
43
muscle of leg
41
common myeloid progenitor, CD34-positive
41
muscle of back
40
liver
40
neural progenitor cell
39
left lung
37
B cell
37
thymus
35
K562
35
endothelial cell
35
fibroblast
35
retina
34
islet of Langerhans
34
right lung
33
macrophage
32
hematopoietic multipotent progenitor cell
32
right kidney
31
renal cortex interstitium
31
renal pelvis
28
spinal cord
27
CD14-positive monocyte
27
hepatocyte
27
left kidney
27
spleen
26
adipocyte
25
heart left ventricle
25
smooth muscle cell
23
CD4-positive, alpha-beta memory T cell
23
adipose tissue
23
pericyte cell
21
MCF-7
21
natural killer cell
20
breast cancer cell
20
pigmented layer of retina
19
keratinocyte
19
pancreas
18
HFFc6
18
T cell
18
foreskin keratinocyte
18
regulatory T cell
17
foreskin fibroblast
17
sigmoid colon
17
trophoblast cell
16
HepG2
16
cardiac muscle cell
16
ovary
16
pancreatic ductal cell
15
CD4-positive, alpha-beta T cell
15
CD8-positive, alpha-beta memory T cell
15
GM12878
15
H9
15
endothelial cell of umbilical vein
15
mesenchymal stem cell
15
psoas muscle
15
retinal pigment epithelial cell
15
tibial nerve
15
transverse colon
14
EndoC_BH1
14
astrocyte
14
gastrocnemius medialis
14
mononuclear cell
thyroid gland
13
body of pancreas
13
caudate nucleus
13
fibroblast of cardiac tissue
13
layer of hippocampus
13
neutrophil
13
osteoblast
13
pancreatic beta cell
13
skeletal muscle myoblast
13
testis
13
upper lobe of left lung
12
T-helper 1 cell
12
coronary artery
12
excitatory neuron
12
fibroblast of lung
12
heart right ventricle
12
lymphoblastoid cell line
12
mammary epithelial cell
12
muscle of trunk
12
neuroblastoma cell
12
neuronal stem cell
12
pancreatic acinar cell
12
prostate gland
12
skeletal muscle tissue
11
chorionic villus
11
embryonic stem cell
11
endothelial cell of hepatic sinusoid
11
erythroblast
11
mammary gland epithelial cell
11
naive thymus-derived CD4-positive, alpha-beta T cell
11
pancreatic alpha cell
11
pancreatic delta cell
10
Peyer's patch
10
Rhabdomyosarcoma
10
T-helper 2 cell
10
bronchial epithelial cell
10
endocrine pancreas
10
gastric cancer cell
10
left renal cortex interstitium
10
right atrium auricular region
10
right renal pelvis
10
skeletal muscle satellite cell
10
subcutaneous adipose tissue
9
T-helper 17 cell
9
diffuse intrinsic pontine glioma
9
epithelial cell of prostate
9
fibroblast of dermis
9
left renal pelvis
9
liposarcoma
9
lymphocyte
9
neurosphere
9
skin fibroblast
9
tibial artery
8
22Rv1
8
B-lymphoblastoid cell line
8
HEK293
8
breast epithelium
8
choroid plexus epithelial cell
8
esophagus
8
fibroblast cell line
8
hepatic stellate cell
8
left cardiac atrium
8
pituitary stalk
8
putamen
8
skeletal muscle fiber
8
substantia nigra
8
temporal lobe
8
trophoblast
7
CD4-positive helper T cell
7
GM06990
7
GM12864
7
GM12865
7
HAP-1
7
HT-29
7
IMR-90
7
Jurkat
7
aorta
7
colonic mucosa
7
esophageal adenocarcinoma
7
esophagus muscularis mucosa
7
esophagus squamous epithelium
7
kidney tubule cell
7
lower leg skin
7
mast cell
7
mature neutrophil
7
mesendoderm
7
omental fat pad
7
thoracic aorta
6
AG04449 cell
6
AG04450 cell
6
AG09309 cell
6
AG09319 cell
6
AG10803 cell
6
Ammon's horn
6
BE(2)-C
6
BJ cell
6
CD1c-positive myeloid dendritic cell
6
CMK
6
Caco-2 cell
6
Chondroid Chordoma
6
GM12875
6
GM19240
6
HUES8
6
LNCAP
6
NAMALWA cell
6
SK-N-MC
6
ascending aorta
6
chondrocyte
6
cingulate gyrus
6
colon epithelial cell
6
endometrium adenocarcinoma
6
eye
6
fibroblast of pulmonary artery
6
frontal cortex
6
globus pallidus
6
glomerular endothelial cell
6
hESC cell
6
iPSC derived cell line
6
immortal human breast epithelial cell line cell
6
induced pluripotent stem cell
6
neuroblastoma cell line
6
parathyroid adenoma
6
renal cortical epithelial cell
6
right renal cortex interstitium
Organ
1
brain
Date released
1
September, 2023
Software used
1
chicago
Lab
1
Struan F.A. Grant, CHOP
Project
1
AMP
RFA
1
AMP2
biosample_term_name!
thyroid gland
files.file_type!
bed bed9
tsv
Showing 1 of 1 results
table-tab-icon
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Download
FileSet
DSR843RXV
released
Annotation file set
: Target gene annotation of open chromatin regions from promoter capture c of ESC (1frag and 4 frag)
Lab:
Struan F.A. Grant, CHOP
Project:
AMP