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Schema
Citing CMDGA
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Annotation type
1
target gene predictions
Annotation Category
1
Target gene links
Annotation type Category
1
Capture-C
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
stem cell
Biosample term
129
monocyte
55
HeLa-S3
51
H1-hESC
49
CD8-positive, alpha-beta T cell
44
islet of Langerhans
42
endothelial cell
39
kidney
39
neural progenitor cell
35
fibroblast
33
macrophage
32
heart
32
hepatocyte
29
retina
29
stomach
26
liver
24
brain
24
smooth muscle cell
23
B cell
23
EndoC_BH1
23
K562
23
adipocyte
23
pancreatic ductal cell
21
pericyte cell
20
breast cancer cell
20
lung
20
pigmented layer of retina
19
CD14-positive monocyte
19
HFFc6
19
epithelial cell of proximal tubule
19
muscle of arm
19
muscle of leg
19
subcutaneous adipose tissue
18
embryonic stem cell
18
heart left ventricle
18
placenta
18
small intestine
17
glomerular endothelial cell
17
large intestine
16
endothelial cell of hepatic sinusoid
16
induced pluripotent stem cell
16
regulatory T cell
16
spleen
15
CD4-positive, alpha-beta T cell
15
common myeloid progenitor, CD34-positive
15
keratinocyte
15
muscle of back
15
natural killer cell
14
T-helper 1 cell
14
astrocyte
14
cardiac muscle cell
14
pancreas
14
pancreatic acinar cell
14
spinal cord
14
thymus
13
GM12878
13
H9
13
coronary artery
13
endothelial cell of umbilical vein
13
excitatory neuron
13
hematopoietic multipotent progenitor cell
13
left lung
13
osteoblast
13
pancreatic beta cell
13
renal cortex interstitium
13
renal pelvis
13
retinal pigment epithelial cell
12
adipose tissue
12
foreskin fibroblast
12
lymphoblastoid cell line
12
mammary epithelial cell
12
neuroblastoma cell
12
neuronal stem cell
12
right lung
11
T cell
11
T-helper 17 cell
11
caudate nucleus
11
erythroblast
11
mesenchymal stem cell
11
naive thymus-derived CD4-positive, alpha-beta T cell
11
tibial nerve
10
MCF-7
10
Rhabdomyosarcoma
10
gastric cancer cell
10
pancreatic alpha cell
10
progenitor cell of endocrine pancreas
10
right kidney
10
substantia nigra
10
tibial artery
9
HepG2
9
cardiomyocytes
9
diffuse intrinsic pontine glioma
9
heart right ventricle
9
liposarcoma
9
ovary
9
putamen
9
right atrium auricular region
9
skeletal muscle myoblast
9
testis
8
A549
8
Ammon's horn
8
B-lymphoblastoid cell line
8
body of pancreas
8
fibroblast cell line
8
foreskin keratinocyte
8
hepatic stellate cell
8
left cardiac atrium
8
mast cell
8
neutrophil
8
omental fat pad
8
pancreatic delta cell
8
pituitary stalk
8
skeletal muscle fiber
8
skeletal muscle satellite cell
7
CD4-positive helper T cell
7
Jurkat
7
cardiomyocytes (cardiac muscle cell)
7
esophageal adenocarcinoma
7
extended pluripotent stem (EPS) cells
7
frontal cortex
7
mature neutrophil
7
pancreatic stellate cell
6
Chondroid Chordoma
6
HEK293
6
HUES8
6
IMR-90
6
LNCAP
6
aorta
6
ascending aorta
6
bronchial epithelial cell
6
cardiac precursors (cardiac muscle cell)
6
chondrocyte
6
fibroblast of cardiac tissue
6
fibroblast of lung
6
glomerular visceral epithelial cell
6
hESC cell
6
iPSC derived cell line
6
left kidney
6
lymphocyte
6
mammary gland epithelial cell
6
neuroblastoma cell line
6
plasma cell
6
sigmoid colon
6
trophoblast cell
6
type I muscle cell
6
upper lobe of left lung
5
cardiac fibroblast
5
Adaptive / Maladaptive / Repairing Fibroblast
5
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
5
Afferent / Efferent Arteriole Endothelial Cell
5
B Cell
5
CD14-positive, CD16-negative classical monocyte
5
CD4-positive, alpha-beta memory T cell
5
Classical Dendritic Cell
5
Connecting Tubule Cell
5
Connecting Tubule Intercalated Cell Type A
5
Connecting Tubule Principal Cell
5
Cortical Thick Ascending Limb Cell
5
CyT49
5
Cycling Endothelial Cell
5
Cycling Epithelial Cell
5
Cycling T Cell
5
Cytotoxic T Cell
5
Degenerative Connecting Tubule Cell
5
Degenerative Connecting Tubule Cell / Principal Cell
5
Degenerative Cortical Thick Ascending Limb Cell
5
Degenerative Distal Convoluted Tubule Cell
5
Degenerative Intercalated Cell Type A
5
Degenerative Peritubular Capillary Endothelial Cell
5
Degenerative Principal Cell
5
Degenerative Proximal Tubule Epithelial Cell
5
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
5
Degenerative Vascular Smooth Muscle Cell
5
Descending Thin Limb Cell Type 1
5
Distal Convoluted Tubule Cell Type 1
5
Ewing sarcoma
5
Fibroblast
5
GM06990
5
GM12864
5
GM12865
5
GM19240
5
Glomerular Capillary Endothelial Cell
5
HAP-1
5
HCT-116 cell
5
KARPAS-422 cell
5
Non-Classical Monocyte
5
PC-9
5
SGBS preadipocytes
5
T-helper 2 cell
5
acute myeloid leukemia
5
amygdala
5
choroid plexus epithelial cell
5
dendritic cell
5
endothelial cell of lymphatic vessel
5
enterocyte
5
glutamatergic neuron
5
hypothalamus
5
kidney interstitial cell
5
kidney loop of Henle thin ascending limb epithelial cell
Organ
1
brain
Date released
1
September, 2023
Software used
1
chicago
Lab
1
Struan F.A. Grant, CHOP
Project
1
AMP
RFA
1
AMP2
month_released!
February, 2020
January, 2021
September, 2022
organ_slims!
adrenal gland
Showing 1 of 1 results
table-tab-icon
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Download
FileSet
DSR843RXV
released
Annotation file set
: Target gene annotation of open chromatin regions from promoter capture c of ESC (1frag and 4 frag)
Lab:
Struan F.A. Grant, CHOP
Project:
AMP