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Citing CMDGA
Clear Filters
Annotation type
1
target gene predictions
Annotation Category
1
Target gene links
Annotation type Category
1
Capture-C
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
stem cell
Biosample term
131
monocyte
88
heart
86
stomach
81
kidney
72
brain
67
lung
67
muscle of arm
64
HeLa-S3
62
A549
62
small intestine
61
adrenal gland
60
placenta
58
muscle of leg
56
large intestine
54
common myeloid progenitor, CD34-positive
54
muscle of back
52
left lung
51
CD8-positive, alpha-beta T cell
50
neural progenitor cell
47
B cell
47
thymus
46
liver
45
right lung
44
endothelial cell
43
hematopoietic multipotent progenitor cell
42
islet of Langerhans
42
right kidney
41
K562
40
renal cortex interstitium
40
renal pelvis
38
retina
36
left kidney
35
fibroblast
35
macrophage
35
spinal cord
34
hepatocyte
33
spleen
32
CD4-positive, alpha-beta memory T cell
31
CD14-positive monocyte
31
heart left ventricle
30
adipose tissue
29
adipocyte
28
regulatory T cell
27
smooth muscle cell
26
MCF-7
26
natural killer cell
25
pancreatic ductal cell
24
pericyte cell
23
T-helper 1 cell
22
CD8-positive, alpha-beta memory T cell
22
EndoC_BH1
22
T cell
22
epithelial cell of proximal tubule
22
foreskin keratinocyte
22
sigmoid colon
21
T-helper 17 cell
21
keratinocyte
20
breast cancer cell
20
glomerular endothelial cell
20
mononuclear cell
20
pigmented layer of retina
19
body of pancreas
19
foreskin fibroblast
19
ovary
19
pancreas
19
tibial nerve
18
HFFc6
18
caudate nucleus
18
endothelial cell of umbilical vein
18
gastrocnemius medialis
18
pancreatic beta cell
18
thyroid gland
18
transverse colon
17
T-helper 2 cell
17
astrocyte
17
cardiac muscle cell
17
embryonic stem cell
17
heart right ventricle
17
mesenchymal stem cell
17
muscle of trunk
17
osteoblast
17
pancreatic acinar cell
17
pancreatic alpha cell
17
psoas muscle
17
testis
16
coronary artery
16
endothelial cell of hepatic sinusoid
16
fibroblast of cardiac tissue
16
fibroblast of lung
16
induced pluripotent stem cell
16
layer of hippocampus
16
retinal pigment epithelial cell
16
subcutaneous adipose tissue
16
upper lobe of left lung
15
CD4-positive, alpha-beta T cell
15
GM12878
15
HepG2
15
mammary gland epithelial cell
15
neutrophil
15
pancreatic delta cell
15
skeletal muscle myoblast
15
skeletal muscle tissue
14
endocrine pancreas
14
prostate gland
14
right atrium auricular region
14
tibial artery
13
Peyer's patch
13
bronchial epithelial cell
13
excitatory neuron
13
neurosphere
13
substantia nigra
12
fibroblast of dermis
12
left renal cortex interstitium
12
lymphoblastoid cell line
12
mammary epithelial cell
12
naive thymus-derived CD4-positive, alpha-beta T cell
12
neuroblastoma cell
12
neuronal stem cell
12
skeletal muscle satellite cell
11
breast epithelium
11
epithelial cell of prostate
11
erythroblast
11
hepatic stellate cell
11
left cardiac atrium
11
left renal pelvis
11
right renal pelvis
11
temporal lobe
10
22Rv1
10
Rhabdomyosarcoma
10
aorta
10
ascending aorta
10
choroid plexus epithelial cell
10
esophagus muscularis mucosa
10
esophagus squamous epithelium
10
frontal cortex
10
gastric cancer cell
10
lymphocyte
10
omental fat pad
10
pancreatic stellate cell
10
progenitor cell of endocrine pancreas
10
right renal cortex interstitium
10
skin fibroblast
10
thoracic aorta
9
SK-N-DZ
9
SK-N-SH
9
cardiomyocytes
9
colonic mucosa
9
diffuse intrinsic pontine glioma
9
glomerular visceral epithelial cell
9
kidney tubule cell
9
liposarcoma
9
parathyroid adenoma
9
putamen
9
tongue
9
vagina
8
GM12865
8
HEK293
8
IMR-90
8
NAMALWA cell
8
cerebellum
8
cingulate gyrus
8
colon epithelial cell
8
dermis blood vessel endothelial cell
8
duodenal mucosa
8
globus pallidus
8
immortal human breast epithelial cell line cell
8
limb
8
lower leg skin
8
mast cell
8
myoepithelial cell of mammary gland
8
naive T cell
8
pituitary stalk
8
skeletal muscle fiber
7
AG04449 cell
7
AG04450 cell
7
AG09309 cell
7
AG09319 cell
7
AG10803 cell
7
Ammon's horn
7
B-lymphoblastoid cell line
7
BJ cell
7
GM06990
7
GM12864
7
HT-29
7
SK-N-MC
7
T47D
7
WERI-Rb-1
7
angular gyrus
7
chorion membrane
7
dermis lymphatic vessel endothelial cell
7
endometrium adenocarcinoma
7
esophageal adenocarcinoma
7
esophagus
7
extended pluripotent stem (EPS) cells
7
eye
7
fibroblast cell line
7
fibroblast of pulmonary artery
7
foreskin melanocyte
7
mature neutrophil
7
memory B cell
Organ
1
brain
Date released
1
September, 2023
Software used
1
chicago
Lab
1
Struan F.A. Grant, CHOP
Project
1
AMP
RFA
1
AMP2
month_released!
February, 2020
March, 2020
organ_slims!
embryo
Showing 1 of 1 results
table-tab-icon
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Download
FileSet
DSR843RXV
released
Annotation file set
: Target gene annotation of open chromatin regions from promoter capture c of ESC (1frag and 4 frag)
Lab:
Struan F.A. Grant, CHOP
Project:
AMP