Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
1
target gene predictions
Annotation Category
1
Target gene links
Annotation type Category
1
Capture-C
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
stem cell
Biosample term
25
brain
10
caudate nucleus
10
pituitary stalk
9
putamen
9
substantia nigra
8
temporal lobe
7
cerebellum
7
choroid plexus epithelial cell
7
frontal cortex
7
layer of hippocampus
5
cardiac fibroblast
5
Ammon's horn
5
SK-N-MC
5
globus pallidus
5
midbrain
4
BE(2)-C
4
SK-N-DZ
4
SK-N-SH
4
U-87 MG
4
amygdala
4
angular gyrus
4
brain pericyte
4
hypothalamus
4
nucleus accumbens
3
Daoy
3
anterior cingulate cortex
3
astrocyte of the cerebellum
3
astrocyte of the hippocampus
3
cerebellum (Hemisphere)
3
cingulate gyrus
3
medulla oblongata
3
middle frontal gyrus
3
pons
3
prefrontal cortex
2
A172
2
M059J
2
brain microvascular endothelial cell
2
cerebellar cortex
2
dorsolateral prefrontal cortex
2
hippocampal neuron
2
middle frontal area 46
2
pituitary gland
1
brain microvascular endothelial cell
1
BE2C
1
Brodmann (1909) area 9
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
Glioblastoma
1
H54
1
anterior parahippocampal gyrus
1
arcuate nucleus of hypothalamus
1
bed nucleus of stria terminalis
1
cardiac fibroblast
1
cerebellar hemisphere
1
claustrum of brain
1
dentate nucleus
1
diencephalon
1
dorsal lateral geniculate nucleus
1
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
1
dura mater
1
entorhinal cortex
1
frontal pole
1
inferior parietal cortex
1
locus ceruleus
1
medial dorsal nucleus of thalamus
1
medulloblastoma
1
mid-frontal lobe
1
myelencephalon
1
nucleus of ventral thalamus
1
paraventricular nucleus of hypothalamus
1
pineal body
1
piriform cortex
1
pituitary
1
pontine tegmentum
1
precentral gyrus
1
pulvinar nucleus
1
raphe nuclei
1
red nucleus
1
septal nuclear complex
1
subiculum
1
superior parietal cortex
1
temporal pole
1
thalamic complex
1
undifferentiated ESC (H9 cell line)
Organ
1
brain
Date released
1
September, 2023
Software used
1
chicago
Lab
1
Struan F.A. Grant, CHOP
Project
1
AMP
RFA
1
AMP2
month_released!
March, 2020
September, 2022
organ_slims!
heart
Showing 1 of 1 results
table-tab-icon
matrix-icon
Download
FileSet
DSR843RXV
released
Annotation file set
: Target gene annotation of open chromatin regions from promoter capture c of ESC (1frag and 4 frag)
Lab:
Struan F.A. Grant, CHOP
Project:
AMP