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Citing CMDGA
Clear Filters
Annotation type
1
target gene predictions
Annotation Category
1
Target gene links
Annotation type Category
1
Capture-C
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
stem cell
Biosample term
73
brain
68
lung
62
A549
52
left lung
45
right lung
22
caudate nucleus
21
coronary artery
20
endothelial cell of umbilical vein
19
tibial artery
18
substantia nigra
16
ascending aorta
16
cerebellum
16
endothelial cell of hepatic sinusoid
16
fibroblast of lung
16
frontal cortex
16
layer of hippocampus
16
upper lobe of left lung
15
putamen
14
temporal lobe
13
aorta
12
Ammon's horn
11
thoracic aorta
10
SK-N-DZ
10
SK-N-SH
10
angular gyrus
10
choroid plexus epithelial cell
10
dermis blood vessel endothelial cell
10
pituitary stalk
9
IMR-90
9
cingulate gyrus
8
PC-9
8
SK-N-MC
8
fibroblast of pulmonary artery
8
globus pallidus
8
midbrain
7
BE(2)-C
7
WI38
7
amygdala
7
hypothalamus
7
nucleus accumbens
7
pulmonary artery endothelial cell
7
smooth muscle cell of the coronary artery
7
type II pneumocyte
6
Brodmann (1909) area 46
6
Daoy
6
anterior cingulate cortex
6
astrocyte of the cerebellum
6
astrocyte of the hippocampus
6
cerebellum (Hemisphere)
6
medulla oblongata
6
middle frontal gyrus
6
pons
5
cardiac fibroblast
5
A172
5
Afferent / Efferent Arteriole Endothelial Cell
5
Degenerative Peritubular Capillary Endothelial Cell
5
Glomerular Capillary Endothelial Cell
5
M059J
5
Peritubular Capillary Endothelial Cell
5
brain microvascular endothelial cell
5
cerebellar cortex
5
fibroblast of the aortic adventitia
5
kidney capillary endothelial cell
5
lung microvascular endothelial cell
4
H54
4
NCI-H226 cell
4
NCI-H460 cell
4
U-87 MG
4
aortic endothelial cell
4
brain pericyte
4
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
4
inferior parietal cortex
4
medulloblastoma
4
pancreatic endothelial cell
4
type I pneumocyte
3
dorsolateral prefrontal cortex
3
prefrontal cortex
2
capillary endothelial cell
2
endothelial cell of coronary artery
2
hippocampal neuron
2
middle frontal area 46
2
pituitary gland
2
vein endothelial cell
1
brain microvascular endothelial cell
1
BE2C
1
Brodmann (1909) area 9
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
Glioblastoma
1
NCI-H226
1
NCI-H460
1
abdominal aorta artery
1
anterior parahippocampal gyrus
1
aorta wall
1
aortic smooth muscle cell
1
arcuate nucleus of hypothalamus
1
bed nucleus of stria terminalis
1
cardiac fibroblast
1
cerebellar hemisphere
1
circle of Willis
1
claustrum of brain
1
dentate nucleus
1
diencephalon
1
dorsal lateral geniculate nucleus
1
dura mater
1
endothelial cell of artery
1
entorhinal cortex
1
frontal pole
1
locus ceruleus
1
lung neuroendocrine cell
1
medial dorsal nucleus of thalamus
1
mid-frontal lobe
1
myelencephalon
1
nucleus of ventral thalamus
1
paraventricular nucleus of hypothalamus
1
pineal body
1
piriform cortex
1
pituitary
1
placental villus capillary endothelial cell
1
pontine tegmentum
1
precentral gyrus
1
pulvinar nucleus
1
raphe nuclei
1
red nucleus
1
septal nuclear complex
1
subiculum
1
superior parietal cortex
1
temporal pole
1
thalamic complex
1
undifferentiated ESC (H9 cell line)
1
whole blood
Organ
1
brain
0
artery
0
blood vessel
0
lung
Date released
1
September, 2023
Software used
1
chicago
Lab
1
Struan F.A. Grant, CHOP
Project
1
AMP
RFA
1
AMP2
Showing 1 of 1 results
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Download
FileSet
DSR843RXV
released
Annotation file set
: Target gene annotation of open chromatin regions from promoter capture c of ESC (1frag and 4 frag)
Lab:
Struan F.A. Grant, CHOP
Project:
AMP