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Annotation type
  • 2differential activity
  • 1candidate regulatory elements
  • 1gene expression
  • 1target gene predictions
Annotation Category
  • 2Gene expression levels
  • 2cis-regulatory elements
  • 1Target gene links
Annotation type Category
  • 3ATAC-seq
  • 2RNA-seq
File set status
  • 5released
Genome assembly (visualization)
  • 1GRCh38
Organism
  • 5Homo sapiens
Biosample type
  • 5tissue
Biosample term
  • 5artery
  • 5liver
  • 5skeletal muscle
  • 5visceral fat
Organ
  • 5adipose tissue
  • 5connective tissue
Life stage
  • 5adult
Date released
  • 5March, 2025
  • 5October, 2025
Software used
  • 2dreamlet
  • 1archr
  • 1scanpy
  • 1sce2g
Lab
  • 5AMP-T2D consortium
Project
  • 5AMP
Collection Tags
  • 5STARNET
RFA
  • 5AMP

Showing 5 of 5 results

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  • FileSet

    DSR485442

    released

    Annotation file set: The dataset contains differentially accessible cCREs between CAD and control in human visceral fat, derived from STARNET ATAC-seq data (milestone 17).
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR352861

    released

    Annotation file set: The dataset contains differentially expressed genes between CAD and control in human visceral fat, derived from STARNET RNA-seq data (milestone 17).
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR546806

    released

    Annotation file set: The dataset contains gene expression levels in human visceral fat, derived from STARNET RNA-seq data (milestone 17).
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR611486

    released

    Annotation file set: The dataset contains cCRE–target gene links in human visceral fat, predicted from STARNET ATAC-seq data with detailed annotation (milestone 17).
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR388902

    released

    Annotation file set: The dataset contains candidate cis-regulatory elements (cCREs) in human visceral fat, derived from STARNET ATAC-seq data (milestone 17).
    Lab: AMP-T2D consortium
    Project: AMP
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