Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema
Clear Filters
Annotation type
  • 7chromatin state
  • 1target gene predictions
Annotation Category
  • 7cis-regulatory elements
  • 1Target gene links
Annotation type Category
  • 7ChIP-seq
  • 1pCHi-C
Available data
  • 7bed bed9+
  • 1bed bed3+
File set status
  • 8released
Genome assembly (visualization)
  • 8hg19
Organism
  • 8Homo sapiens
Biosample type
  • primary cell
  • 7cell line
  • 1tissue
Biosample term
  • 1BL-2 cell
  • 1DG-75 cell
  • 1JVM-2 cell
  • 1KARPAS-422 cell
  • 1SUDHL5
  • 1U-266 cell
  • 1Z-138
  • 1thymus
Organ
  • 1thymus
Life stage
  • 7unknown
Date released
  • 7May, 2022
  • 1May, 2020
Software used
  • 7chromhmm
  • 1chicago
Lab
  • 8AMP-T2D consortium
Project
  • 8AMP
Collection Tags
  • 8BLUEPRINT
  • 1T1D
RFA
  • 8AMP
biosample_type!
  • primary cell

Showing 8 of 8 results

table-tab-iconmatrix-icon

  • FileSet

    DSR985OOF

    released

    Annotation file set: Chromatin state of BL-2 from BLUEPRINT ChromHmm Segmentation of ChIP-Seq data
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR159QVD

    released

    Annotation file set: Chromatin state of SUDHL5 from BLUEPRINT ChromHmm Segmentation of ChIP-Seq data
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR530KQW

    released

    Annotation file set: Chromatin state of JVM-2 cell from BLUEPRINT ChromHmm Segmentation of ChIP-Seq data
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR308LDV

    released

    Annotation file set: Chromatin state of KARPAS-422 cell from BLUEPRINT ChromHmm Segmentation of ChIP-Seq data
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR048INZ

    released

    Annotation file set: Chromatin state of DG-75 cell from BLUEPRINT ChromHmm Segmentation of ChIP-Seq data
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR146YIV

    released

    Annotation file set: Chromatin state of U-266 cell from BLUEPRINT ChromHmm Segmentation of ChIP-Seq data
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR515DJY

    released

    Annotation file set: Chromatin state of Z-138 from BLUEPRINT ChromHmm Segmentation of ChIP-Seq data
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR149GJC

    released

    Annotation file set: Target gene predictions annotation of EGAS00001001911 promoter capture Hi-C of thymus
    Lab: AMP-T2D consortium
    Project: AMP
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego