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Citing CMDGA
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Annotation type
1
chromatin state
1
eQTL
Annotation Category
1
Genetic variant effects
1
cis-regulatory elements
Annotation type Category
1
ChIP-seq
1
RNA-seq
Available data
bed bed3+
1
bed bed9
1
bigWig
File set status
2
released
Genome assembly (visualization)
2
GRCh38
1
hg19
Organism
2
Homo sapiens
Biosample type
tissue
1
cell line
1
primary cell
Biosample term
1
Leydig cell
1
NT2-D1 cell
Disease term
1
testicular embryonal carcinoma
Organ
395
epithelium
267
kidney
84
connective tissue
73
pancreas
66
vasculature
44
blood vessel
32
liver
31
skin of body
30
embryo
27
lung
25
bodily fluid
23
blood
16
brain
14
mammary gland
12
bone element
12
musculature of body
11
prostate gland
10
artery
10
extraembryonic component
10
penis
9
heart
8
lymph node
7
lymphatic vessel
5
vein
4
eye
4
intestine
4
large intestine
3
uterus
2
bone marrow
2
bronchus
2
gonad
2
mouth
2
placenta
2
testis
1
adipose tissue
1
esophagus
1
limb
1
lymphoid tissue
1
nose
1
pericardium
1
spinal cord
Life stage
1
unknown
Date released
1
January, 2022
1
September, 2022
Software used
1
chromhmm
1
qTLtools
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
biosample_type!
tissue
files.file_type!
bed bed3+
organ_slims!
small intestine
Showing 2 of 2 results
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Download
FileSet
DSR549AED
released
Annotation file set
: Chromatin states for BSS01386 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR212NXP
released
Annotation file set
: HLC eQTL of studay PhLiPS from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP