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Assay category
2
3D chromatin structure
Assay
2
Hi-C
Project
2
AMP
RFA
1
AMP
1
AMP2
Experiment status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
11
tissue
6
primary cell
4
in vitro differentiated cells
2
cell line
Organ
1
epithelium
1
liver
1
pancreas
Life stage
1
embryonic
1
unknown
Available data
582
bam
522
bigWig
427
fastq
404
bed narrowPeak
355
bigBed narrowPeak
119
tsv
59
bed broadPeak
59
bigBed broadPeak
20
tagAlign
3
bed bed3+
3
tar
2
bedpe bed3+
2
hic
1
bed bed3
1
bed bedMethyl
1
bigBed bedMethyl
1
hdf5
1
txt
1
vcf
Library made from
2
DNA
Date released
1
August, 2021
1
November, 2019
Lab
1
AMP-T2D consortium
1
Bing Ren, UCSD
Replication type
2
unreplicated
Audit category:
1
inconsistent ontology term
Showing 2 of 2 results
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Experiment
DSR744JJN
released
Hi-C
of HepG2
Homo sapiens
HepG2
Lab:
Bing Ren, UCSD
Project:
AMP
Experiment
DSR433ZII
released
Audit error
1
Hi-C
of EndoC_BH1
Homo sapiens
EndoC_BH1
Lab:
AMP-T2D consortium
Project:
AMP