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Clear Filters
Annotation type
  • 4target gene predictions
  • 3gene expression
Annotation Category
  • 4Target gene links
  • 3Gene expression levels
Annotation type Category
  • 3RNA-seq
  • 3pCHi-C
  • 1HiC
Available data
  • 4bed bed3+
  • 3tsv
File set status
  • 7released
Genome assembly (visualization)
  • 4hg19
Organism
  • 7Homo sapiens
Biosample type
  • 104tissue
  • 10in vitro differentiated cells
  • 7cell line
  • 5primary cell
  • 2stem cell
Biosample term
  • 1B-lymphoblastoid cell line
  • 1EndoC_BH1
  • 1HepG2
  • 1RCC 7860 HIF1a re-expression
  • 1RCC 7860 HIF2a over-expression
  • 1RCC 7860 vector
  • 1fibroblast cell line
Organ
  • 3kidney
  • 1epithelium
  • 1liver
  • 1pancreas
Life stage
  • 3unknown
Date released
  • 1304February, 2021
  • 542September, 2022
  • 168February, 2024
  • 152June, 2020
  • 70October, 2022
  • 63May, 2021
  • 10January, 2022
  • 9August, 2021
  • 9March, 2023
  • 7March, 2020
  • 7May, 2022
  • 5August, 2017
  • 2May, 2020
  • 1February, 2023
  • 1January, 2020
  • 1March, 2024
  • 1November, 2019
Software used
  • 3r
  • 2nospecificsoft_customcode
  • 1chicago
  • 1hiccups
Lab
  • 7AMP-T2D consortium
Project
  • 7AMP
Collection Tags
  • 7DGA
  • 2 T2DKP
RFA
  • 7AMP

Showing 7 of 7 results

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  • FileSet

    DSR373FUA

    released

    Annotation file set: A target gene prediction annotation in EndoC_BH1 of DSR433ZII Hi-C
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR499URQ

    released

    Annotation file set: A target gene prediction annotation in HepG2 of DSR452PKJ pCHi-C E-MTAB-7144
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR362JPD

    released

    Annotation file set: A target gene prediction annotation in Human Fibroblasts of GSE86189 pCHi-C
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR870IAS

    released

    Annotation file set: A target gene prediction annotation in Human Lymphoblasts of GSE86189 pCHi-C
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR252PDX

    released

    Annotation file set: Gene expression levels of RCC 7860 vector from RNA-seq (GSE67237)
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR695LFD

    released

    Annotation file set: Gene expression levels of RCC 7860 HIF2a over-expression from RNA-seq (GSE67237)
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR422ZVW

    released

    Annotation file set: Gene expression levels of RCC 7860 HIF1a re-expression from RNA-seq (GSE67237)
    Lab: AMP-T2D consortium
    Project: AMP
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