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Clear Filters
Annotation type
  • 3gene expression
  • 2candidate regulatory elements
  • 1chromatin state
  • 1target gene predictions
Annotation Category
  • 3Gene expression levels
  • 3cis-regulatory elements
  • 1Target gene links
Annotation type Category
  • 4ChIP-seq
  • 3DNase-seq
  • 3single cell RNA-seq
Available data
  • 3bed bed3+
  • 3csv
  • 3tsv
  • 1bed bed9
File set status
  • 7released
Genome assembly (visualization)
  • 4hg19
  • 1GRCh38
Organism
  • 7Homo sapiens
Biosample type
  • 65primary cell
  • 63tissue
  • 28cell line
  • 7in vitro differentiated cells
Biosample term
  • 4hepatocyte
  • 3hepatocyte(AFP)
Organ
  • 50connective tissue
  • 30embryo
  • 26epithelium
  • 9skin of body
  • 7liver
  • 6eye
  • 6penis
  • 5extraembryonic component
  • 4brain
  • 4nose
  • 3mammary gland
  • 3pancreas
  • 2lymphatic vessel
  • 2musculature of body
  • 2vasculature
  • 1adipose tissue
  • 1heart
  • 1kidney
Life stage
  • 4embryonic
  • 3unknown
Date released
  • 3February, 2024
  • 3September, 2022
  • 1February, 2021
Software used
  • 5r
  • 1chromhmm
  • 1encode-ccres
Lab
  • 7AMP-T2D consortium
Project
  • 7AMP
Collection Tags
  • 3AMP
  • 3EpiMap
  • 1ENCODE
RFA
  • 7AMP

Showing 7 of 7 results

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  • FileSet

    DSR201DTC

    released

    Annotation file set: Candidate regulatory elements for BSS00556 hepatocyte from EpiMap
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR926ULW

    released

    Annotation file set: Target gene predictions for BSS00556 hepatocyte from EpiMap
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR642PKA

    released

    Annotation file set: Chromatin states for BSS00556 using the 18-state Roadmap model from EpiMap
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR129ATN

    released

    Annotation file set: Gene expression annotaion of liver cell in phase S from single cell transcriptome profiling of hESC-derived pancreatic progenitors
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR572UJX

    released

    Annotation file set: Gene expression annotaion of liver cell in phase G2M from single cell transcriptome profiling of hESC-derived pancreatic progenitors
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR437EKE

    released

    Annotation file set: Gene expression annotaion of liver cell in phase G1 from single cell transcriptome profiling of hESC-derived pancreatic progenitors
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR731RPD

    released

    Annotation file set: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE hepatocyte
    Lab: AMP-T2D consortium
    Project: AMP
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