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Schema
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Annotation type
7
target gene predictions
Annotation Category
7
Target gene links
Annotation type Category
4
Capture-C
3
pCHi-C
Available data
7
bed bed3+
File set status
7
released
Genome assembly (visualization)
7
hg19
Organism
7
Homo sapiens
Biosample type
16
primary cell
7
in vitro differentiated cells
2
tissue
1
cell line
1
stem cell
Biosample term
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
Human Mesenchymal Cell derived Adipocytes
1
Human Mesenchymal Cell derived Osteoblasts
1
cardiomyocytes (cardiac muscle cell)
1
lymphocyte of B lineage (iPSC)
1
white adipose cell
Organ
3
connective tissue
2
brain
1
adipose tissue
Life stage
2
adult
Date released
4
September, 2023
2
March, 2020
1
May, 2020
Software used
201
macs
144
r
44
chromhmm
44
encode-ccres
17
abc
7
chicago
6
deltasvm
4
hiccups
2
nospecificsoft_customcode
1
altius-index
Lab
4
Struan F.A. Grant, CHOP
3
AMP-T2D consortium
Project
7
AMP
Collection Tags
4
AMP
3
DGA
1
T2DKP
RFA
4
AMP2
3
AMP
Showing 7 of 7 results
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Download
FileSet
DSR383OMT
released
Annotation file set
: Target gene annotation of open chromatin regions from promoter capture c of ESC derived Hypothalamic Progenitor (1frag and 4 frag)
Lab:
Struan F.A. Grant, CHOP
Project:
AMP
FileSet
DSR416XCR
released
Annotation file set
: Target gene annotation of open chromatin regions from promoter capture c of ESC derived Hypothalamic Neuron (1frag and 4 frag)
Lab:
Struan F.A. Grant, CHOP
Project:
AMP
FileSet
DSR841JDM
released
Annotation file set
: Target gene annotation of open chromatin regions from promoter capture c of Human Mesenchymal Cell derived Osteoblasts (1frag and 4 frag)
Lab:
Struan F.A. Grant, CHOP
Project:
AMP
FileSet
DSR722BWL
released
Annotation file set
: Target gene annotation of open chromatin regions from promoter capture c of Human Mesenchymal Cell derived Adipocytes (1frag and 4 frag)
Lab:
Struan F.A. Grant, CHOP
Project:
AMP
FileSet
DSR854NSN
released
Annotation file set
: A target gene prediction annotation in cardiomyocytes (cardiac muscle cell) of DSR382TEU pCHi-C E-MTAB-6014
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR991ZOB
released
Annotation file set
: A target gene prediction annotation in lymphocyte of B lineage (iPSC) of DSR535XNG pCHi-C E-MTAB-6014
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR355DOK
released
Annotation file set
: A target gene prediction annotation in white adipose cell of TSTSR423QSN pCHi-C
Lab:
AMP-T2D consortium
Project:
AMP