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Schema
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Embeddings type
2
Gene expression
1
Accessible chromatin
Embeddings Category
3
umap
Underlying Assay
6
10X scRNA-seq
Smart-seq
1
10X snATAC-seq
Available data
3
h5ad
File set status
3
released
Organism
2
Homo sapiens
Biosample type
36
tissue
3
primary cell
Biosample term
2
islet of Langerhans
2
pancreas
2
peripheral blood mononuclear cell
1
immune system
Tissue term
2
blood
2
pancreas
1
leukocyte
Organ
2
blood
2
bodily fluid
2
pancreas
Life stage
1
adult
Date released
2
August, 2021
1
May, 2022
Lab
2
Kyle Gaulton, UCSD
1
AMP-T2D consortium
Project
2
T1D
1
AMP
RFA
2
T1D
1
AMP
embeddings_underlying_assay!
Smart-seq
Showing 3 of 3 results
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FileSet
DSR996NUW
released
Embeddings file set
: The human cell atlas of all immune cells from 24 organs of 15 normal human subjects (22-74 years old) from Tabula Sapiens.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR675TJW
released
Embeddings file set
: Clustering of scRNA-seq profiles from 90,495 cells from single cell experiments of peripheral blood mononuclear cells, whole pancreas tissue, and purified pancreatic islets
Lab:
Kyle Gaulton, UCSD
Project:
T1D
FileSet
DSR047LET
released
Embeddings file set
: Clustering of accessible chromatin profiles from 131,554 cells from single cell experiments of peripheral blood mononuclear cells, whole pancreas tissue, and purified pancreatic islets
Lab:
Kyle Gaulton, UCSD
Project:
T1D