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Annotation type
4
chromatin state
Annotation Category
4
cis-regulatory elements
Annotation type Category
4
ChIP-seq
Available data
1669
bed bed3+
597
tsv
410
bigWig
164
bed bed9
108
txt
27
bed bed9+
16
bigBed narrowPeak
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
2
csv
File set status
4
released
Genome assembly (visualization)
4
GRCh38
4
hg19
Organism
4
Homo sapiens
Biosample type
31
tissue
5
in vitro differentiated cells
4
primary cell
Biosample term
2
endothelial cell of umbilical vein
1
mesenchymal stem cell
1
skeletal muscle satellite cell
Organ
2
blood vessel
2
epithelium
2
vasculature
2
vein
1
connective tissue
1
musculature of body
Life stage
2
adult
Date released
2
January, 2020
2
October, 2019
Software used
4
chromhmm
Lab
4
AMP-T2D consortium
Project
4
AMP
Collection Tags
1
T2DKP
RFA
4
AMP
Showing 4 of 4 results
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Download
FileSet
DSR214PMG
released
Annotation file set
: ChromHMM 18-state model for endothelial cell of umbilical vein from ENCODE ChIP-seq data. ROADMAP HUVEC Umbilical Vein Endothelial Primary Cells
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR772SPX
released
Annotation file set
: ChromHMM 15-state model for endothelial cell of umbilical vein from ENCODE ChIP-seq data. ROADMAP HUVEC Umbilical Vein Endothelial Primary Cells
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR195QYE
released
Annotation file set
: ChromHMM 15-state model for adult Skeletal Muscle Satellite Cell from ENCODE ChIP-seq data.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR139NCZ
released
Annotation file set
: ChromHMM 15-state model for Mesenchymal Stem Cell from ENCODE ChIP-seq data.
Lab:
AMP-T2D consortium
Project:
AMP