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Clear Filters
Annotation type
  • 5accessible chromatin
  • 2chromatin state
Annotation Category
  • 7cis-regulatory elements
Annotation type Category
  • 5ATAC-seq
  • 2ChIP-seq
Available data
  • 5bed bed3+
  • 5bigWig
  • 2bed bed9
  • 2bigBed bed9
File set status
  • 7released
Genome assembly (visualization)
  • 7GRCh38
  • 7hg19
Organism
  • 7Homo sapiens
Biosample type
  • 7primary cell
  • 5tissue
  • 2in vitro differentiated cells
Biosample term
  • 2pancreatic beta cell
  • 1mesenchymal stem cell
  • 1pancreatic acinar cell
  • 1pancreatic alpha cell
  • 1pancreatic ductal cell
  • 1skeletal muscle satellite cell
Organ
  • 5epithelium
  • 5pancreas
  • 1connective tissue
  • 1musculature of body
Life stage
  • 4adult
  • 1child
  • 1newborn
Date released
  • 487September, 2022
  • 456February, 2021
  • 333November, 2021
  • 281September, 2023
  • 256May, 2021
  • 152February, 2024
  • 86May, 2020
  • 56January, 2021
  • 55March, 2023
  • 53June, 2020
  • 42August, 2021
  • 40May, 2022
  • 40May, 2024
  • 37January, 2022
  • 31October, 2022
  • 23January, 2020
  • 19April, 2020
  • 16February, 2020
  • 9August, 2018
  • 9November, 2022
  • 7October, 2019
  • 6August, 2017
  • 6March, 2025
  • 5March, 2020
  • 4February, 2023
  • 3November, 2020
  • 2January, 2025
  • 1July, 2020
  • 1June, 2021
  • 1March, 2024
Software used
  • 5macs
  • 2chromhmm
Lab
  • 7AMP-T2D consortium
Project
  • 7AMP
Collection Tags
  • 6T2DKP
RFA
  • 7AMP

Showing 7 of 7 results

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  • FileSet

    DSR920WKD

    released

    Annotation file set: Pancreatic ductal cell accessible chromatin annotation of overlapping ATAC-seq sites from 3 samples with most significant peak selected
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR112LAM

    released

    Annotation file set: Pancreatic beta cell accessible chromatin annotation of overlapping ATAC-seq sites from 2 children samples with most significant peak selected
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR616QUT

    released

    Annotation file set: Pancreatic beta cell accessible chromatin annotation of overlapping ATAC-seq sites from 5 samples with most significant peak selected
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR110ITH

    released

    Annotation file set: Pancreatic alpha cell accessible chromatin annotation of overlapping ATAC-seq sites from 5 samples with most significant peak selected
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR639GZY

    released

    Annotation file set: Pancreatic acinar cell accessible chromatin annotation of overlapping ATAC-seq sites from 4 samples with most significant peak selected
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR195QYE

    released

    Annotation file set: ChromHMM 15-state model for adult Skeletal Muscle Satellite Cell from ENCODE ChIP-seq data.
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR139NCZ

    released

    Annotation file set: ChromHMM 15-state model for Mesenchymal Stem Cell from ENCODE ChIP-seq data.
    Lab: AMP-T2D consortium
    Project: AMP
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