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Schema
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Annotation type
2
accessible chromatin
1
eQTL
1
target gene predictions
Annotation Category
2
cis-regulatory elements
1
Genetic variant effects
1
Target gene links
Annotation type Category
1
ATAC-seq
1
DNase-seq
1
RNA-seq
1
snATAC-seq
Available data
4
bed bed3+
1
bigWig
File set status
4
released
Genome assembly (visualization)
3
GRCh38
3
hg19
Organism
4
Homo sapiens
Biosample type
52
tissue
8
cell line
4
primary cell
Biosample term
2
luteal cell
1
Leydig cell
1
somatic gonadal cell
Organ
822
epithelium
466
blood
338
connective tissue
335
kidney
231
brain
205
heart
171
skin of body
169
vasculature
150
pancreas
135
liver
123
blood vessel
78
lung
68
eye
62
musculature of body
60
__MARKER__
52
adipose tissue
50
mammary gland
46
muscle organ
43
extraembryonic component
41
penis
37
artery
36
thymus
25
adrenal gland
24
spleen
23
intestine
23
thyroid gland
22
embryo
20
vein
18
bone element
17
lymphatic vessel
16
bronchus
13
bone marrow
11
esophagus
11
placenta
11
prostate gland
11
stomach
9
bodily fluid
6
large intestine
5
skeleton
5
trachea
5
uterus
4
gonad
4
mouth
4
small intestine
4
spinal cord
2
ovary
1
limb
1
pericardium
1
testis
Date released
2
November, 2021
1
January, 2022
1
June, 2020
Software used
2
macs
1
abc
1
qTLtools
Lab
2
AMP-T2D consortium
2
Bing Ren, UCSD
Project
2
AMP
2
ENCODE
Collection Tags
2
AMP
2
T2DKP
1
ChIP-Atlas
1
T1D
1
T2D
1
eQTLCatalogue
RFA
2
AMP
2
ENCODE3
Showing 4 of 4 results
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Download
FileSet
DSR212NXP
released
Annotation file set
: HLC eQTL of studay PhLiPS from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR246QUC
released
Annotation file set
: Target gene predictions of Luteal Cell (Ovarian) from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR562HUD
released
Annotation file set
: Accessible chromatin annotation of Luteal Cell (Ovarian) from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR547ORX
released
Annotation file set
: Accessible chromatin annotation for Gonad Gonad somatic cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP