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Annotation type
2
candidate regulatory elements
1
chromatin state
1
target gene predictions
Annotation Category
3
cis-regulatory elements
1
Target gene links
Annotation type Category
4
ChIP-seq
3
DNase-seq
Available data
3
bed bed3+
1
bed bed9
File set status
4
released
Genome assembly (visualization)
4
hg19
1
GRCh38
Organism
4
Homo sapiens
Biosample type
13
tissue
4
cell line
4
primary cell
Biosample term
4
fibroblast of gingiva
Organ
822
epithelium
466
blood
338
connective tissue
335
kidney
231
brain
205
heart
171
skin of body
169
vasculature
150
pancreas
135
liver
123
blood vessel
78
lung
68
eye
62
musculature of body
60
__MARKER__
52
adipose tissue
50
mammary gland
46
muscle organ
43
extraembryonic component
41
penis
37
artery
36
thymus
25
adrenal gland
24
spleen
23
intestine
23
thyroid gland
22
embryo
20
vein
18
bone element
17
lymphatic vessel
16
bronchus
13
bone marrow
11
esophagus
11
placenta
11
prostate gland
11
stomach
9
bodily fluid
6
large intestine
5
skeleton
5
trachea
5
uterus
4
gonad
4
mouth
4
small intestine
4
spinal cord
2
ovary
1
limb
1
pericardium
1
testis
Life stage
4
unknown
Date released
3
September, 2022
1
February, 2021
Software used
2
r
1
chromhmm
1
encode-ccres
Lab
4
AMP-T2D consortium
Project
4
AMP
Collection Tags
3
EpiMap
1
ENCODE
RFA
4
AMP
Showing 4 of 4 results
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Download
FileSet
DSR602POK
released
Annotation file set
: Candidate regulatory elements for BSS00338 fibroblast of gingiva from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR611XHN
released
Annotation file set
: Target gene predictions for BSS00338 fibroblast of gingiva from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR302IPT
released
Annotation file set
: Chromatin states for BSS00338 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR354XIS
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE fibroblast of gingiva
Lab:
AMP-T2D consortium
Project:
AMP