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Schema
Clear Filters
Annotation type
2
caQTL
Annotation Category
2
Genetic variant effects
Annotation type Category
2
ATAC-seq
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
GRCh38
Organism
2
Homo sapiens
Biosample type
12
tissue
2
primary cell
Biosample term
2
CD4-positive helper T cell
Date released
2
October, 2022
Software used
831
r
710
macs
220
chromhmm
168
encode-ccres
157
abc
111
deseq2
80
deltasvm
50
qTLtools
32
cicero
25
seurat
16
chicago
15
limix
12
deeptools
12
samtools
12
umitools
9
rasqual
9
salmon
5
eigenmt
3
minfi
3
sqtlseeker
2
matrix-eQTL
1
bedops
1
hiccups
1
pepatac
1
unknown
Lab
2
Stephen S. Rich Lab @UVA
Project
2
T1D
Collection Tags
2
T1D
RFA
2
T1D
Showing 2 of 2 results
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Download
FileSet
DSR077VUE
released
Annotation file set
: full cis-caQTL stats for 10 T1D-associated regions
Lab:
Stephen S. Rich Lab @UVA
Project:
T1D
FileSet
DSR578KNM
released
Annotation file set
: nominally significant results from cis-caQTL scan
Lab:
Stephen S. Rich Lab @UVA
Project:
T1D